Nannochloropsis gaditana: NGA_0225500
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Entry
NGA_0225500 CDS
T02917
Name
(RefSeq) hypothetical protein
KO
K14791
periodic tryptophan protein 1
Organism
ngd
Nannochloropsis gaditana
Brite
KEGG Orthology (KO) [BR:
ngd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ngd03009
]
NGA_0225500
Ribosome biogenesis [BR:
ngd03009
]
Eukaryotic type
90S particles
Other 90S particles
NGA_0225500
Pre-60S particles
Other pre-60S particles
NGA_0225500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML
WD40_WDHD1_1st
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
PALB2_WD40
NBCH_WD40
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
17360976
NCBI-ProteinID:
XP_005854204
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MNNAHPHSHYKQGYIGSRSSLSYKNRSRMISSITWVPRGAANPNPPRFQACKEEVEALLR
EHGGGNNELERQDFEEEDEEEGQNGELDRHGLPVELHMDDYDDEDEAAGGAQKAAFIHAD
ASEEEEGVENGEDEEDEDEEEVGIMEEEEEEEEGEEEDEGEEGEEVEEEEEESGRGKEDQ
QRNELAGALPASAFLRGMDDNDEEDDDSEDMEDHMIKSTDAVVLVANTEDEEHSALEVHV
YEEDTGSLYIHHDISLPAFPLCVAWGHCPPVPGRESERGSFAAVGTFKPGIEIWDVDIID
PLEPVRILGGEKALQGTASSWSKAGKKGGKKKKKRRQNEDELVEGSHEGPVMTLAWNQFH
RQVLASGSADSTIKLWDVTTGECSATLAHHTDKADPECVGWCPHAPSTLLCTTEDGSLVA
WDVRAPSGPLWKAKVHTKTCSSFSFSALAPGLMATCGMDKTVKLWDYSGDPGVPPRQLGE
KAMSVGKLFSISFYPSSPFLLATGGDKGLLALWNLHECEGVMRRFGEGGGKGEKEGMQAA
SMMEGMSLEGTGDGEKERGEQKDKKKDKGGKGKAPSGKARSQTGTSGKGSRKK
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgcgcacccacactcgcattacaagcagggatacattggatcgcgttcatcc
ttgtcatataaaaatagaagcagaatgatttcttccattacatgggtgcctcggggcgcc
gcgaaccccaatccccctcgtttccaagcgtgcaaagaagaagtcgaggccctacttcgt
gagcatggaggtggtaataacgagctcgaaagacaagatttcgaagaggaggatgaagaa
gaagggcaaaatggcgagttggaccggcatggtttgcctgttgagcttcatatggacgat
tacgatgacgaggatgaagccgcgggaggggcgcagaaggccgctttcatccacgcagac
gccagtgaggaggaagaaggcgttgagaatggggaggatgaggaggatgaggatgaggag
gaagtgggtataatggaggaggaagaggaggaggaggagggagaggaggaagacgaaggg
gaggaaggggaggaagtagaggaagaggaagaggaaagtggaagaggaaaggaggatcag
cagagaaatgagctcgcaggagccttgccagcaagtgcgtttctgcgaggtatggatgat
aatgacgaggaagacgacgacagcgaggacatggaggaccacatgattaagtcgacagac
gcggtcgttctggtggcgaataccgaggacgaggagcactcggccctggaggtccatgtc
tatgaggaggacacgggctcgctctacatccaccacgatatctccctccccgccttcccc
ctctgtgtagcctggggccactgcccgcccgtgccgggacgggagagcgagcgcggctcc
tttgcggccgtggggacgttcaaaccggggattgagatatgggacgtggacatcattgat
ccgcttgagccagtccgcatactgggcggtgaaaaggcgctgcagggcaccgcctcttcg
tggagcaaagccggcaagaagggcgggaagaaaaagaagaaacggcgccaaaatgaagac
gaactcgtggagggcagtcatgagggccccgtcatgacgctcgcttggaaccaattccac
agacaggtcctggcctccggctcggccgacagcactattaagctctgggacgtgacgacg
ggcgagtgctccgccacgctcgcgcaccacaccgacaaggctgaccccgagtgcgtgggc
tggtgtcctcatgctccctccaccctcctgtgtaccaccgaagacggcagcctggtcgcc
tgggacgtcagggctccctcgggccccctgtggaaagccaaggtgcacacgaagacttgc
tcctccttctctttctccgccctcgccccgggcctgatggccacgtgcggcatggacaag
acggtcaagctctgggattattcgggcgatcccggcgtccccccgcgacagctgggagag
aaagcgatgtccgtcgggaaactcttctccatctccttctatcccagctcgcccttcctg
ttggccacggggggagacaaggggctgctggctttgtggaatctgcacgaatgcgagggc
gtgatgcgacgtttcggggaaggaggagggaaaggcgagaaggagggtatgcaggcggcg
agcatgatggaggggatgagcctggaggggactggggacggagagaaggagaggggggag
cagaaggacaaaaagaaggacaagggcggtaaggggaaagcaccgagtggaaaagcaaga
tcacagacaggaacgagtggaaaaggaagccgaaagaagtag
DBGET
integrated database retrieval system