KEGG   Nannochloropsis gaditana: NGA_0225500
Entry
NGA_0225500       CDS       T02917                                 
Name
(RefSeq) hypothetical protein
  KO
K14791  periodic tryptophan protein 1
Organism
ngd  Nannochloropsis gaditana
Brite
KEGG Orthology (KO) [BR:ngd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ngd03009]
    NGA_0225500
Ribosome biogenesis [BR:ngd03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    NGA_0225500
  Pre-60S particles
   Other pre-60S particles
    NGA_0225500
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_EIPR1 WDR55 Beta-prop_RIG_2nd Beta-prop_EML WD40_WDHD1_1st WD40_RFWD3 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_RIG_1st Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd Beta-prop_DCAF12 eIF2A Beta-prop_WDR35_TULP_N Beta-prop_SCAP PALB2_WD40 NBCH_WD40 Beta-prop_SPT8
Other DBs
NCBI-GeneID: 17360976
NCBI-ProteinID: XP_005854204
LinkDB
Position
Unknown
AA seq 593 aa
MNNAHPHSHYKQGYIGSRSSLSYKNRSRMISSITWVPRGAANPNPPRFQACKEEVEALLR
EHGGGNNELERQDFEEEDEEEGQNGELDRHGLPVELHMDDYDDEDEAAGGAQKAAFIHAD
ASEEEEGVENGEDEEDEDEEEVGIMEEEEEEEEGEEEDEGEEGEEVEEEEEESGRGKEDQ
QRNELAGALPASAFLRGMDDNDEEDDDSEDMEDHMIKSTDAVVLVANTEDEEHSALEVHV
YEEDTGSLYIHHDISLPAFPLCVAWGHCPPVPGRESERGSFAAVGTFKPGIEIWDVDIID
PLEPVRILGGEKALQGTASSWSKAGKKGGKKKKKRRQNEDELVEGSHEGPVMTLAWNQFH
RQVLASGSADSTIKLWDVTTGECSATLAHHTDKADPECVGWCPHAPSTLLCTTEDGSLVA
WDVRAPSGPLWKAKVHTKTCSSFSFSALAPGLMATCGMDKTVKLWDYSGDPGVPPRQLGE
KAMSVGKLFSISFYPSSPFLLATGGDKGLLALWNLHECEGVMRRFGEGGGKGEKEGMQAA
SMMEGMSLEGTGDGEKERGEQKDKKKDKGGKGKAPSGKARSQTGTSGKGSRKK
NT seq 1782 nt   +upstreamnt  +downstreamnt
atgaacaacgcgcacccacactcgcattacaagcagggatacattggatcgcgttcatcc
ttgtcatataaaaatagaagcagaatgatttcttccattacatgggtgcctcggggcgcc
gcgaaccccaatccccctcgtttccaagcgtgcaaagaagaagtcgaggccctacttcgt
gagcatggaggtggtaataacgagctcgaaagacaagatttcgaagaggaggatgaagaa
gaagggcaaaatggcgagttggaccggcatggtttgcctgttgagcttcatatggacgat
tacgatgacgaggatgaagccgcgggaggggcgcagaaggccgctttcatccacgcagac
gccagtgaggaggaagaaggcgttgagaatggggaggatgaggaggatgaggatgaggag
gaagtgggtataatggaggaggaagaggaggaggaggagggagaggaggaagacgaaggg
gaggaaggggaggaagtagaggaagaggaagaggaaagtggaagaggaaaggaggatcag
cagagaaatgagctcgcaggagccttgccagcaagtgcgtttctgcgaggtatggatgat
aatgacgaggaagacgacgacagcgaggacatggaggaccacatgattaagtcgacagac
gcggtcgttctggtggcgaataccgaggacgaggagcactcggccctggaggtccatgtc
tatgaggaggacacgggctcgctctacatccaccacgatatctccctccccgccttcccc
ctctgtgtagcctggggccactgcccgcccgtgccgggacgggagagcgagcgcggctcc
tttgcggccgtggggacgttcaaaccggggattgagatatgggacgtggacatcattgat
ccgcttgagccagtccgcatactgggcggtgaaaaggcgctgcagggcaccgcctcttcg
tggagcaaagccggcaagaagggcgggaagaaaaagaagaaacggcgccaaaatgaagac
gaactcgtggagggcagtcatgagggccccgtcatgacgctcgcttggaaccaattccac
agacaggtcctggcctccggctcggccgacagcactattaagctctgggacgtgacgacg
ggcgagtgctccgccacgctcgcgcaccacaccgacaaggctgaccccgagtgcgtgggc
tggtgtcctcatgctccctccaccctcctgtgtaccaccgaagacggcagcctggtcgcc
tgggacgtcagggctccctcgggccccctgtggaaagccaaggtgcacacgaagacttgc
tcctccttctctttctccgccctcgccccgggcctgatggccacgtgcggcatggacaag
acggtcaagctctgggattattcgggcgatcccggcgtccccccgcgacagctgggagag
aaagcgatgtccgtcgggaaactcttctccatctccttctatcccagctcgcccttcctg
ttggccacggggggagacaaggggctgctggctttgtggaatctgcacgaatgcgagggc
gtgatgcgacgtttcggggaaggaggagggaaaggcgagaaggagggtatgcaggcggcg
agcatgatggaggggatgagcctggaggggactggggacggagagaaggagaggggggag
cagaaggacaaaaagaaggacaagggcggtaaggggaaagcaccgagtggaaaagcaaga
tcacagacaggaacgagtggaaaaggaagccgaaagaagtag

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