Nannochloropsis gaditana: NGA_0231500
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Entry
NGA_0231500 CDS
T02917
Symbol
RAB5C
Name
(RefSeq) Ras-related protein Rab-5C
KO
K07887
Ras-related protein Rab-5A
Organism
ngd
Nannochloropsis gaditana
Pathway
ngd04144
Endocytosis
ngd04145
Phagosome
ngd04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ngd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
NGA_0231500 (RAB5C)
04145 Phagosome
NGA_0231500 (RAB5C)
04148 Efferocytosis
NGA_0231500 (RAB5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngd04131
]
NGA_0231500 (RAB5C)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngd04147
]
NGA_0231500 (RAB5C)
04031 GTP-binding proteins [BR:
ngd04031
]
NGA_0231500 (RAB5C)
Membrane trafficking [BR:
ngd04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
NGA_0231500 (RAB5C)
Endosome - Lysosome transport
NGA_0231500 (RAB5C)
Exosome [BR:
ngd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NGA_0231500 (RAB5C)
Exosomal proteins of other body fluids (saliva and urine)
NGA_0231500 (RAB5C)
Exosomal proteins of colorectal cancer cells
NGA_0231500 (RAB5C)
Exosomal proteins of bladder cancer cells
NGA_0231500 (RAB5C)
GTP-binding proteins [BR:
ngd04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
NGA_0231500 (RAB5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
AIRC
Motif
Other DBs
NCBI-GeneID:
17361192
NCBI-ProteinID:
XP_005854416
LinkDB
All DBs
Position
Unknown
AA seq
261 aa
AA seq
DB search
DAFLRGRGKAPAQCDDQARRRTERLLYAPQRVTLTLFPSNASQTTTQLHPQETRDDFRTM
TSGGGSSSNNRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLED
STVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSV
IIALAGNKADLAGTRRKVDLKDAEEYARENGLLHFETSAKDAQNVKTLFVEIAKRLPKAV
APVEREAFPIVAPKASKRSCC
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
gatgctttcttgcgaggaagaggcaaagctcccgcccagtgtgatgatcaggcaaggcga
agaactgagcgacttctttatgcaccacaacgcgtgacacttacccttttcccctccaac
gcatctcagacaaccactcagttgcacccccaagaaactagagacgatttcagaaccatg
accagcggcggcggcagcagtagcaacaaccgggtgtgccatttcaagcttgtccttctg
ggcgacacagcagttggcaaatcatgcttggttgtccgcttcgtccgagatgaatttttt
gaataccaggaacctaccattggtgcagctttccttacgcaagctgtagtactggaagat
tccacagttaaattcgaaatatgggacacagctggccaagaacgttaccggtcgctagcc
cccatgtactacagaggagcttcggcggctattgtcgtttatgacatcaccaatgcggag
agcttcaaaggtgccaaatcgtgggtcaaagagctacaaaggcggggagatcccagcgta
atcatcgctctggcaggaaataaggcagatctggcggggacgcgtaggaaggttgattta
aaggacgctgaggaatacgcccgagagaatggcttactgcatttcgaaaccagcgcaaaa
gatgctcaaaatgtcaaaaccctttttgttgagatcgcgaagcgattgcccaaggctgtt
gcacccgtggagcgggaggcttttcctattgtggccccgaaagcatcaaaacggtcgtgt
tgctga
DBGET
integrated database retrieval system