KEGG   Nannochloropsis gaditana: NGA_0231500
Entry
NGA_0231500       CDS       T02917                                 
Symbol
RAB5C
Name
(RefSeq) Ras-related protein Rab-5C
  KO
K07887  Ras-related protein Rab-5A
Organism
ngd  Nannochloropsis gaditana
Pathway
ngd04144  Endocytosis
ngd04145  Phagosome
ngd04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ngd00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    NGA_0231500 (RAB5C)
   04145 Phagosome
    NGA_0231500 (RAB5C)
   04148 Efferocytosis
    NGA_0231500 (RAB5C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ngd04131]
    NGA_0231500 (RAB5C)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ngd04147]
    NGA_0231500 (RAB5C)
   04031 GTP-binding proteins [BR:ngd04031]
    NGA_0231500 (RAB5C)
Membrane trafficking [BR:ngd04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    NGA_0231500 (RAB5C)
 Endosome - Lysosome transport
    NGA_0231500 (RAB5C)
Exosome [BR:ngd04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   NGA_0231500 (RAB5C)
  Exosomal proteins of other body fluids (saliva and urine)
   NGA_0231500 (RAB5C)
  Exosomal proteins of colorectal cancer cells
   NGA_0231500 (RAB5C)
  Exosomal proteins of bladder cancer cells
   NGA_0231500 (RAB5C)
GTP-binding proteins [BR:ngd04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    NGA_0231500 (RAB5C)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA AIRC
Other DBs
NCBI-GeneID: 17361192
NCBI-ProteinID: XP_005854416
LinkDB
Position
Unknown
AA seq 261 aa
DAFLRGRGKAPAQCDDQARRRTERLLYAPQRVTLTLFPSNASQTTTQLHPQETRDDFRTM
TSGGGSSSNNRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLED
STVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSV
IIALAGNKADLAGTRRKVDLKDAEEYARENGLLHFETSAKDAQNVKTLFVEIAKRLPKAV
APVEREAFPIVAPKASKRSCC
NT seq 786 nt   +upstreamnt  +downstreamnt
gatgctttcttgcgaggaagaggcaaagctcccgcccagtgtgatgatcaggcaaggcga
agaactgagcgacttctttatgcaccacaacgcgtgacacttacccttttcccctccaac
gcatctcagacaaccactcagttgcacccccaagaaactagagacgatttcagaaccatg
accagcggcggcggcagcagtagcaacaaccgggtgtgccatttcaagcttgtccttctg
ggcgacacagcagttggcaaatcatgcttggttgtccgcttcgtccgagatgaatttttt
gaataccaggaacctaccattggtgcagctttccttacgcaagctgtagtactggaagat
tccacagttaaattcgaaatatgggacacagctggccaagaacgttaccggtcgctagcc
cccatgtactacagaggagcttcggcggctattgtcgtttatgacatcaccaatgcggag
agcttcaaaggtgccaaatcgtgggtcaaagagctacaaaggcggggagatcccagcgta
atcatcgctctggcaggaaataaggcagatctggcggggacgcgtaggaaggttgattta
aaggacgctgaggaatacgcccgagagaatggcttactgcatttcgaaaccagcgcaaaa
gatgctcaaaatgtcaaaaccctttttgttgagatcgcgaagcgattgcccaaggctgtt
gcacccgtggagcgggaggcttttcctattgtggccccgaaagcatcaaaacggtcgtgt
tgctga

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