Nannochloropsis gaditana: NGA_0233320
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Entry
NGA_0233320 CDS
T02917
Symbol
POLD1
Name
(RefSeq) DNA polymerase delta subunit 1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
ngd
Nannochloropsis gaditana
Pathway
ngd03030
DNA replication
ngd03410
Base excision repair
ngd03420
Nucleotide excision repair
ngd03430
Mismatch repair
ngd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ngd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NGA_0233320 (POLD1)
03410 Base excision repair
NGA_0233320 (POLD1)
03420 Nucleotide excision repair
NGA_0233320 (POLD1)
03430 Mismatch repair
NGA_0233320 (POLD1)
03440 Homologous recombination
NGA_0233320 (POLD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngd03032
]
NGA_0233320 (POLD1)
03400 DNA repair and recombination proteins [BR:
ngd03400
]
NGA_0233320 (POLD1)
Enzymes [BR:
ngd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NGA_0233320 (POLD1)
DNA replication proteins [BR:
ngd03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
NGA_0233320 (POLD1)
DNA repair and recombination proteins [BR:
ngd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
NGA_0233320 (POLD1)
MMR (mismatch excision repair)
DNA polymerase delta complex
NGA_0233320 (POLD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
zf-C4pol
divDNApol
DNA_pol_B_2
DUF6974
Motif
Other DBs
NCBI-GeneID:
17360935
NCBI-ProteinID:
XP_005854165
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MARVTGVPMAFLLTRGQQIKVFSMLLRKCRQSALLIPNLPKNRQDEGTYEGATVIEPKKA
FYQDPIATLDFASLYPSIMQAFNLCYSTLLSREEKQALPPSSYITTPSQESFVKPSVRKG
ILPLILDELLAARKRAKRDMAAATDPMEKAVQNGRQLALKISANSVYGFTGATVGQLPCI
PIASSVTSYGRDLLYQTKAFVEEHYTIEKGCSANAEVVYGDTDSVMVRFGVPTVEEAMPL
AERAAEEVTKIFPPPIKLEFEKVYFPYLLMNKKRYAGLLWTRPDKYDKLDTKGLETVRRD
NCLLVRRVIDTCLRKILIDRDVPGAIGYCKHVIAELLQNKMDISLLVITKALGKSADESG
YAAKQAHVELAMRMKKRDPGTAPNVGDRVAYVIIQAGKGAPAYERSEDPVYVLENRIPID
TDYYLQNQLSNPLTRLFEPIIDNPESLLSGDHTRSIARPTPTAKAGGIMMFAVKKLKCLG
CKTPIPETEKSTLCVHCAPREAEIYTQKALEVAGHEGVFAKLWTQCQRCQGSFHQDILCS
NRDCPIFYKRKKVQKDLADAQDALDRFAF
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtgtcacgggcgtgcccatggccttcctcctcacgcgcgggcagcagatcaag
gtcttctccatgttgctcagaaagtgccgccagtccgccctgctcattcccaacctgccg
aagaaccggcaagacgagggcacctacgagggcgccaccgtcatcgagcccaagaaagcc
ttctaccaggaccccattgccaccctggacttcgcctctctgtacccctccatcatgcag
gcctttaacctctgctactccaccctcctctcccgggaggagaaacaggcgcttccccct
tcctcctacatcaccacgccttcccaagaatccttcgtcaagcccagcgtccgcaaaggc
atcctgcccctcattctcgacgagctcctggcggcccggaagcgcgccaagagggacatg
gcggcggccacggacccgatggagaaggccgtccagaacgggcggcagctggccctcaag
atctccgccaacagcgtctacggcttcacaggggccacggtcgggcagctcccttgcatc
cccatcgcctcctccgtcacctcctacgggagagacttgctgtatcagaccaaggccttc
gtggaagagcactacacgatcgagaagggctgttcggccaacgccgaggtcgtgtacgga
gacacggactcggtgatggtccgtttcggggtcccgaccgtggaggaggccatgcccttg
gcggagcgggcggcggaggaggtgaccaaaattttcccgccccccatcaagctcgagttc
gagaaggtctacttcccctacctgctcatgaacaagaagcggtacgccggcctcctgtgg
acccggcccgacaagtacgacaagctggacacgaaggggctcgagaccgtccgccgcgac
aactgcctcttggtccggcgggtcatcgacacttgcctgcggaagatcctgatcgaccgg
gatgtccccggcgccattggctactgcaagcacgtgatcgccgagctcctccagaacaag
atggacatatccctcctcgtcatcaccaaggctttgggcaagtctgccgacgaaagcggg
tacgcggccaagcaggcccatgtggagctggcgatgcgtatgaagaagagggaccccggg
accgcgcccaacgtgggtgaccgggtggcctacgtcatcatccaggcagggaaaggagcc
cctgcctacgagcggagcgaggacccggtgtacgtgcttgagaacaggatcccgattgac
acggactattacctgcagaatcagctcagtaaccccctcacgcggctgttcgagcccatc
atcgacaacccggaaagcctcctttccggagaccacacgcgttcgatcgcccgtccgacc
ccaacggccaaggcggggggcatcatgatgtttgcggtcaagaagctcaaatgcctgggc
tgcaagactcccattcccgagacggagaagtcgacgctttgcgtgcactgcgcgcctcgg
gaggctgagatctacacgcaaaaagccttggaggtggcgggccatgaaggtgtgttcgcc
aagttgtggacgcagtgccagcgttgccagggctccttccaccaggatatcttgtgttcc
aaccgggactgccccatattctacaagcggaagaaggtccagaaggacctggccgacgcc
caagacgcgctcgacaggttcgcgttctga
DBGET
integrated database retrieval system
