Nannochloropsis gaditana: NGA_0391300
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Entry
NGA_0391300 CDS
T02917
Symbol
RFC2_4
Name
(RefSeq) replication factor C subunit 2/4
KO
K10755
replication factor C subunit 2/4
Organism
ngd
Nannochloropsis gaditana
Pathway
ngd03030
DNA replication
ngd03410
Base excision repair
ngd03420
Nucleotide excision repair
ngd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ngd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NGA_0391300 (RFC2_4)
03410 Base excision repair
NGA_0391300 (RFC2_4)
03420 Nucleotide excision repair
NGA_0391300 (RFC2_4)
03430 Mismatch repair
NGA_0391300 (RFC2_4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngd03032
]
NGA_0391300 (RFC2_4)
03036 Chromosome and associated proteins [BR:
ngd03036
]
NGA_0391300 (RFC2_4)
03400 DNA repair and recombination proteins [BR:
ngd03400
]
NGA_0391300 (RFC2_4)
DNA replication proteins [BR:
ngd03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
NGA_0391300 (RFC2_4)
DNA Replication Termination Factors
ELG1-RFC complex
NGA_0391300 (RFC2_4)
Chromosome and associated proteins [BR:
ngd03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
NGA_0391300 (RFC2_4)
DNA repair and recombination proteins [BR:
ngd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
NGA_0391300 (RFC2_4)
Check point factors
HRAD17(Rad24)-RFC complex
NGA_0391300 (RFC2_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA
DNAX_ATPase_lid
AAA_22
Gp44_lid
AAA_assoc_2
Motif
Other DBs
NCBI-GeneID:
17361778
NCBI-ProteinID:
XP_005855000
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MATAAAASSGTLPNVQGEKDAPPGLLPWVEKYRPVTLNDVVGNTEAIDRLKVVAQDGNMP
HMLLAGPPVRLVARITTFSSSSHILSASLPPLQGTGKTSSIVCLSRELLGEEHLGASSLL
SLPYSRPCKVFTPAFPFSFVLPLAISTGAAVLELNASDERGIDVIRSRIKMFAQKKVVLP
PGRHKVVILDEADSMTSAAQQALRRTMEIYSHTTRFALACNTSSKIIEPIQSRCAILRFS
RLADEILSLPVSLVKSSARTSRGKRVDSLPSRSSPAFPASPSPSIAQEILDRLRQICEAE
HVGFSDDGLEAVIFTAEGDMRNAINNLQSTYSGFGYVNQANVFKVCDQPHPLLMKEVLDL
CAGSGDLKAAQEKLLRVWNLGYSASDIVGTLFKVCRNHGTMNEGTKLNFIREIGMVHMRI
AEGLNSRTQILGLLAKLCALQHKQQQQHENGKGQSN
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggctacagctgctgccgcctcctcagggacccttcccaacgtgcagggggagaaagac
gcgcctccaggtctcttgccctgggtagaaaaatatcgtccagtcacactgaatgatgtg
gtaggcaacacggaagccatcgaccgcctgaaggtggtggctcaagacgggaacatgcct
cacatgctgcttgcgggccctccggtgcgtctcgtagctaggatcacgaccttctcctct
tcttctcacatcctctcggcttccctccctcctctccagggcactgggaaaacctcctcc
atcgtgtgcctgtcccgcgagttgctgggcgaggagcatttgggtgcgtcctctttgctc
tccctaccctactctcgcccttgcaaggtcttcacgccggccttccccttttctttcgtc
ctcccactggccatttccacaggagcggcggtgctggagctgaacgcctcggacgagcga
ggcatcgacgtgatccgttcccggatcaagatgttcgcgcaaaaaaaggtcgtcctccct
cccggtagacataaggtagtgatcctggacgaggcagactccatgacaagtgccgcccag
caggcgttgcggcgcactatggagatctactcgcatacgacccgctttgctctcgcctgc
aacaccagtagcaagatcatcgagcccatccagtcacgctgcgccatactccgcttctcc
cgcttggccgacgagattctctctctgcctgtcagtctagtcaagtccagcgcacgtacc
tcgcgtgggaagcgggtcgactcccttccctcccgctcatcgcctgctttccctgcctcc
ccctctccttctatcgcacaggaaatcctggatcgcctccgccagatatgtgaggccgag
cacgtcggcttctccgatgatggacttgaagcagtcatcttcacggcggagggtgacatg
cgcaatgccataaacaacctgcagagcacttatagcggcttcggctacgtcaaccaggcg
aacgtcttcaaagtgtgcgatcagccccacccgctcctcatgaaggaggtcctcgacctc
tgtgcgggctccggagacctcaaggcggcgcaggagaagctgttgcgggtatggaacctg
ggctacagcgcatcggacattgtcggaacgctgtttaaggtctgccggaatcacgggacg
atgaacgagggcaccaaacttaattttatccgggagatcggcatggtccacatgcgcatt
gcggaaggtctcaactcacgcacacaaatactgggcttattggccaagctctgcgcccta
cagcacaagcagcagcagcagcatgagaatggaaaggggcaaagcaattga
DBGET
integrated database retrieval system
