KEGG   Nannochloropsis gaditana: NGA_0434201
Entry
NGA_0434201       CDS       T02917                                 
Symbol
RPB12
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC4
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
ngd  Nannochloropsis gaditana
Pathway
ngd03020  RNA polymerase
ngd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ngd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NGA_0434201 (RPB12)
  09124 Replication and repair
   03420 Nucleotide excision repair
    NGA_0434201 (RPB12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ngd03021]
    NGA_0434201 (RPB12)
   03400 DNA repair and recombination proteins [BR:ngd03400]
    NGA_0434201 (RPB12)
Transcription machinery [BR:ngd03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     NGA_0434201 (RPB12)
  RNA polymerase III system
   RNA polymerase III
     NGA_0434201 (RPB12)
  RNA polymerase I system
   RNA polymerase I
     NGA_0434201 (RPB12)
DNA repair and recombination proteins [BR:ngd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      NGA_0434201 (RPB12)
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 MCM_OB Zn_ribbon_10 DUF7130 Zn_ribbon_DZR_6 DUF5817 FYDLN_acid
Other DBs
NCBI-GeneID: 17360745
NCBI-ProteinID: XP_005853971
LinkDB
Position
Unknown
AA seq 83 aa
MMSGAGGGPYGHYGSGAGGGVGEGGTTGVGGAMARELSGVTYLCGDCGAQNVIKNKDPIR
CRQCNHRIMYKMRTKRVVQFEAR
NT seq 252 nt   +upstreamnt  +downstreamnt
atgatgtcgggcgcaggcggtggaccttacggccattatggctccggggcaggtggaggc
gttggtgaaggagggactaccggcgttggcggggccatggcgcgggagctaagcggcgtg
acttatttatgcggagattgtggtgcccagaacgtgataaaaaacaaggatccaattcgt
tgccggcagtgcaaccataggattatgtacaaaatgcggacgaagcgcgtggtgcaattt
gaagcccgatag

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