Nannochloropsis gaditana: NGA_0435400
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Entry
NGA_0435400 CDS
T02917
Symbol
RPC1
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ngd
Nannochloropsis gaditana
Pathway
ngd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ngd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NGA_0435400 (RPC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngd03021
]
NGA_0435400 (RPC1)
Enzymes [BR:
ngd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NGA_0435400 (RPC1)
Transcription machinery [BR:
ngd03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
NGA_0435400 (RPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
17360335
NCBI-ProteinID:
XP_005853564
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MAAPLPVRSAARWEELAGHYGEKKIRGLCQRLKGKSGRFRGNLSGKRVDFSGRTVISPDP
NLAIDQVGVPLQVAKIMTYPERVSASNRERLKRLVLNGPSHHPGANIIRPSGDNAFTKSL
SYADERQRRKMAEDLKLGDVVERHMVDEDVVLFNRQPSLHKLSIMAHRVKVMPWRTFRFN
ECVCAPYNADFDGDEMNMHLPQTEEARAEAATLMGVTSNLVTPRNGEPMVAATQDFITGA
YLLTQKDVFLTREAFCRLAAYLGDAAEHIDLPPPSIVWPHQLWTGKQVFSLLIKASHRVD
CDVNLEMEERNYSKAEAMAYLCPQDGFVCIRRSELVSGNLCKKTLGGQKGGLYYVLLRDK
GAEHAARCMNRLAKLCGRLIGGHRGFSIGIDDVMPSPVLLDLKRVLLEAGFSKCDEQIRL
YETGKLPLKPGCNSLQSLESELNSVLGGIRRKCGEEALQKLPWHNAPRIMTECGSKGSDI
NISQMMAILGQQSVGGKRIENGFVNRTLPHFRPESLFPAARGFVPNSFFSGLTAT
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccctctccctgtccgcagtgcggcgagatgggaggagctggcgggccactac
ggggagaagaagatccgaggcctgtgccagcgcctcaaggggaagagcgggcgctttcgg
ggcaacctctcggggaaacgcgtcgacttctccggccgcaccgtcatctccccggaccct
aacctggccattgaccaggtgggagtgcccctgcaggtggccaagatcatgacctacccc
gagcgcgtctcggcctcgaaccgggagcgtctgaagcgccttgtcctgaacggcccttcc
caccaccccggcgccaacatcatccggccttcgggcgacaatgccttcaccaagagcctc
agctacgcggacgagcggcagcggcggaagatggcggaggatctgaagctgggggacgtg
gtggagcggcacatggtggatgaggacgtcgttctcttcaaccgacagccctccctgcac
aagctctccatcatggcccaccgggtcaaggtcatgccctggcggaccttccgcttcaac
gagtgcgtgtgcgcgccctacaacgccgacttcgacggcgacgagatgaacatgcacctg
ccccagacggaggaggcgcgggcggaggcggccaccctgatgggcgtgacctcgaacctg
gtgactccgcggaatggagagcccatggtggcggccacgcaggatttcatcacaggcgcc
tacctgctcacccagaaggacgtcttcctcacgcgcgaggccttctgtcgcctcgccgcg
tacctaggagacgcagccgagcacattgaccttcctcccccctccatcgtctggccccac
cagctctggacgggcaagcaagtcttcagcctcctaatcaaggcctcgcaccgcgtggat
tgcgacgtgaacctggaaatggaggagcggaactactccaaggcggaggccatggcctac
ctctgccctcaggacggctttgtatgcatccggcgtagcgagcttgtctcgggcaacctg
tgcaagaagaccctgggtggacagaaggggggcctctactacgtgctgctcagggacaag
ggggctgagcacgcggctaggtgcatgaaccggcttgccaagctctgcgggcgcctgatc
ggggggcatcgggggttttccatcggcattgacgacgtgatgccctcccccgtgctcttg
gacctgaagcgagtcttgctcgaggcgggcttcagcaagtgcgacgaacagatccggctc
tatgagacggggaagcttcctttgaaaccgggctgcaattcgttgcaatccttggagtcg
gagctgaactcggtcctgggagggatccgacgcaagtgcggggaggaggctttgcagaag
ctcccctggcacaacgcgccgcggatcatgaccgagtgcgggtccaagggctccgacatc
aacatctcccagatgatggccatccttggccagcagtccgtggggggcaagcgcatcgag
aacggctttgtcaaccgaactctgccccatttccgccccgaatccctcttccccgccgcc
cgaggctttgtgcccaattccttcttctcggggctcacggccacc
DBGET
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