Nannochloropsis gaditana: NGA_0446101
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Entry
NGA_0446101 CDS
T02917
Name
(RefSeq) deah (asp-glu-ala-his) box polypeptide 35
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
ngd
Nannochloropsis gaditana
Pathway
ngd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NGA_0446101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngd03041
]
NGA_0446101
Enzymes [BR:
ngd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NGA_0446101
Spliceosome [BR:
ngd03041
]
Complex C
Other components
Step II factors
NGA_0446101
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
Flavi_DEAD
ABC_tran
AAA_29
FtsK_SpoIIIE
UvrC_RNaseH
AAA_16
AAA_7
nSTAND3
Motif
Other DBs
NCBI-GeneID:
17360298
NCBI-ProteinID:
XP_005853529
LinkDB
All DBs
Position
Unknown
AA seq
761 aa
AA seq
DB search
MKRPREEVGSHQLTAFQPTPSRRQHQNARQQLPIWRQKTYVVETVRRHASVVLVGETGSG
KSTQVPQFLLDAGFCAGIVEAQGSTPSPIRARKLIACTQPRRVAAITVAGRVAEEMGCAL
GQAVGYAVRFDDKTGPRTVIKYMTDGVLLREAMTDPLLTRYAVIILDEAHERSLQTDILF
GLIRRAQREREDLRVVVMSATLDVEVFRRFFETGGRKEEKALIKRHGENGKHEKGKLSRE
GQASTVGVVRIEGRQYGVEVYYCEEAQEDSIDAACLAVLQIHESEPLPGDILVFLSGQED
IEALAELLSESAGTDTSIGKTGLCMEICPLYSALAPEEQAKAFHPPKGPAKSTRKVILAT
NIAETSVTINGIRHVVDTGWVKVRRYVPSTGLDSLKTTQIARAQAQQRTGRAGREAPGKC
YRLFTESAFERLDAVPQPEIQRVNLTQVVLQLLAMGVDDPQHFDYLSPPSATALARAFET
LLALGCIAEGGLSPGGNVDGTRILIPEKDDRQAVEAQADQKPSGPAKSRPVITPHGRRVA
SLPLDPVYAHFVLRASELGCLFEALTAVSMLSAENVLYMPSPHGGPDAAEQRNRATTAHR
ALAAYDGDVPTLVHIYERWVAAKKGNRWCWDHFVNARAMKKADEVREQLLLLVRRLGLDP
SQSCGNERQIFLRSLAAGLFLNVARRQPATSPALGKYCYKMLANGREAAIHPSSVLHARN
PAPQCVVFTEVLTTSRPYIRGVSIVDPADLQELVPQFFGRA
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggccgcgtgaagaggtgggctctcatcaacttactgccttccagccaactccc
tcgcggcggcagcaccaaaacgcacgccagcagttgcccatctggcgacagaaaacttac
gttgtcgagactgtgcggcgacatgccagtgttgttctcgtgggcgagactggcagtgga
aagagtactcaggtacctcagtttttgctcgatgctggtttttgcgctggcatcgtcgag
gctcaaggtagcacaccatcgccgatccgggcacgcaaactgatagcatgtactcaacca
cgacgcgtggcggccattactgtggctgggcgggtagccgaagagatgggttgtgcgtta
ggccaagccgtcggctatgcggttcgcttcgacgacaagaccggcccgcgcactgtcatc
aagtacatgaccgacggtgtgcttttacgagaagccatgactgacccacttttaacgcgg
tacgctgttattatcctggatgaagctcacgaacggtcgttgcagacggatatcttgttt
gggttgatccggcgtgcgcagcgagaacgcgaggatctgcgcgtagtggtgatgtcagct
accctggatgtggaggtgttccggcgattttttgagactggagggagaaaagaagagaag
gcattgatcaaaaggcacggagaaaacgggaagcatgagaaaggaaagctttcgcgcgaa
ggccaggcgtccacggtaggcgtcgtgcggatcgagggccgacagtacggcgtggaggtg
tactactgcgaggaggcacaagaggattccatcgacgcagcttgtctggccgtccttcaa
atccacgagagcgagcccctccccggggacattttggtgttcctctccggtcaggaagac
atcgaggcccttgccgagcttctgtcggagagcgccggaaccgatacttctatcggcaag
acagggctatgcatggaaatttgccctctctactcagcgttagccccggaggaacaagcc
aaggcctttcatcctcccaagggccccgcgaagagcacccgaaaagtcatactggccacg
aacatcgccgagacctcggttacgatcaacggtatccgacacgttgttgacacgggctgg
gttaaggttcgacgctacgtgccttccaccggactcgacagcctcaagaccacacagatt
gcccgagctcaggctcagcaacggacaggccgggccggccgggaggcgcctgggaagtgt
tatcgcctctttaccgagtccgccttcgaacgtctggacgccgtgccccagccagagatt
cagcgggtaaacctcacgcaggtcgtgctgcaactcctggccatgggtgtggacgaccct
cagcatttcgactacctgtctcccccctcagctacggccttggcccgggcctttgagacc
ttactcgccctgggctgcatcgcagagggaggcttgtcacctggagggaacgttgatggt
acacgcattttaatcccagaaaaggacgacagacaggctgtggaggcccaggcggaccag
aagccatcgggccctgccaagtcgcgcccggtaatcaccccgcacggccgtcgagtggcc
tccctgcccctagaccccgtctacgcacacttcgtcctccgcgccagcgaactcggctgc
ctctttgaggcgttgactgccgtttccatgctgtcagcggagaacgtcctttacatgccc
tccccacacggaggccctgatgcagctgagcaacgaaaccgcgccacgactgctcatcgc
gcgttggcagcctacgatggagatgttcctactctggtgcacatttatgagcggtgggtg
gcggcgaagaagggaaatcgatggtgctgggatcatttcgtgaacgcgcgggccatgaaa
aaggccgacgaggtgcgggagcaattgctgcttctggtccgtcgcctgggcttagaccct
tcccagtcctgcgggaacgagcggcagatctttctccggagtctggctgcgggactgttt
ttgaacgtcgcacggcgccagcccgctacctcccccgccctgggcaaatattgctacaag
atgctggcgaacgggcgggaggcggccattcacccttccagtgtcctgcacgcccggaat
ccggccccccagtgcgtcgtctttacggaggtcttgacaaccagtcgtccttacattcgc
ggcgtcagcatcgtggaccctgctgatttgcaggaactggtgccgcaattttttgggcgg
gcatga
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integrated database retrieval system
