Nannochloropsis gaditana: NGA_0460610
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Entry
NGA_0460610 CDS
T02917
Name
(RefSeq) intraflagellar transport protein 52
KO
K19681
intraflagellar transport protein 52
Organism
ngd
Nannochloropsis gaditana
Brite
KEGG Orthology (KO) [BR:
ngd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ngd03037
]
NGA_0460610
Cilium and associated proteins [BR:
ngd03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
NGA_0460610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IFT52_GIFT
Itf52_C
DUF4350
Motif
Other DBs
NCBI-GeneID:
17360684
NCBI-ProteinID:
XP_005853911
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
EQALSRFLLVEGQSVLLLLSEGVGNNQCGSEEGPSSLLNRWLQPWGMHAHHDAVLRRRRH
PRFPHPKEVFLSLSSLPETEDDQAGKDERQEEEKDPGFSFVYPYGCSLSVAPPAKVLLSS
GPYSYPAHRPVLAAWEGRAEGEDGGEGKGAGRREEAGKEEEKRLNEGERGKGRGGGGAGG
GGGRRGGRLVVLGAVDMWTDAWLDQEDNGWLADVIFRVGARKAPEGEGEGKERGGEGWHH
SRPLVLPRSQWLLHREPDAESSAPPSNLGQASFSHDRSPSRLAQLLFCGDARPEQERAHD
PALPPALPPSLQPRLCTPRVRDLAQQLRPCLQGKMYSTPQSHVDLNNLLNPPDEGGREGG
RGRGKAGVPPGEEPPLYALRPNTLLPEVLATHHALGLEPEHPLRPVAPEFVFASPRTQLA
RLFHKCASSRLEGAKEGSREDLSYFVREAAEIVGLHDLSSSESASGGKELEAGKEEEDAA
KNTLAVLVEQLARWKGRGGSG
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
gaacaagccctctctcgcttcctgctcgtagaggggcaaagcgtcctccttctcctctca
gaaggggtggggaacaatcaatgcgggagcgaggagggccctagttctcttcttaaccgc
tggctccagccctggggcatgcacgcgcaccacgacgctgttctccggcggcggagacac
cctcgctttccccatcccaaggaggtcttcctctccctgtcctctttgcctgagacggaa
gacgaccaggcggggaaggacgaaaggcaggaagaggagaaggacccgggcttctccttc
gtctatccctacggttgctccctgtccgttgcgccccctgcgaaggtcctgctctcctcc
ggcccttactcttatcccgcccaccgcccagtgctggccgcctgggagggtcgtgcggag
ggagaggacggaggggaggggaagggtgcgggaaggcgggaggaggcggggaaggaagaa
gagaagaggttgaatgaaggggaaaggggcaaaggtcgaggagggggaggtgcaggtgga
ggaggagggaggagaggagggcggctggttgtcctgggcgcggtggacatgtggaccgac
gcgtggctcgaccaagaggacaatggctggctcgcggatgtgattttccgggtaggggca
agaaaggcgccggagggggagggggaggggaaggaaagggggggggaaggctggcaccac
tcacgtcctcttgtcctccctcgttcccagtggctgctccatcgcgagccggacgcggag
tccagcgcccctccctctaacttgggtcaagccagttttagccatgaccgttccccctcc
cggcttgctcagctcctcttctgtggggacgcgaggccagagcaggagcgggcgcatgac
cccgccctccctcccgccctccctccctccctacaaccacgcttgtgcaccccacgtgtc
cgagacctcgcgcagcagcttcgaccgtgtcttcagggaaaaatgtactctacgccgcaa
agtcacgtcgatctcaacaacctgctcaaccctcccgatgaaggaggacgggaaggaggg
cgagggagagggaaagcaggcgttccccctggagaggaaccgcctttgtacgcactgcga
ccaaacacgctgctcccagaagtcctcgcaacgcaccacgctctgggtctggaaccagag
cacccgttgaggcccgtggcgccggagttcgtgtttgcgtcgccacggacccaattggcg
cgtctcttccacaaatgtgcctcgagcaggttggaaggggcaaaagaaggatccagggag
gatttgagctattttgtgcgcgaggctgctgagatcgttggcctgcacgatttatcctcc
tccgagtccgcctccggtgggaaggagctcgaggcgggaaaagaggaggaggacgcagcc
aagaatacgctggccgtgcttgtggagcagctcgcccgttggaaaggaagaggggggtcg
gggtaa
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integrated database retrieval system
