KEGG   Nannochloropsis gaditana: NGA_0480900
Entry
NGA_0480900       CDS       T02917                                 
Name
(RefSeq) hypothetical protein
  KO
K14772  U3 small nucleolar RNA-associated protein 20
Organism
ngd  Nannochloropsis gaditana
Brite
KEGG Orthology (KO) [BR:ngd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ngd03009]
    NGA_0480900
Ribosome biogenesis [BR:ngd03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    NGA_0480900
SSDB
Motif
Pfam: UTP20 UTP20_C HEAT HEAT_Maestro TPR_Trm732_C TOR1L1_N Npa1 Tti2
Other DBs
NCBI-GeneID: 17360628
NCBI-ProteinID: XP_005853855
LinkDB
Position
Unknown
AA seq 1151 aa
MADSEMGGAMQNGREDKGGGKAEDEAEGVRERSISNPPTDALKKDVIWRAVTTQLLPSLR
GLLLKDSKDKEGGKQKVLRAPMALALLKLIKMLPRTSYEQELTRLFMSVCGTLRSRDSNV
RDAAREVLAKMAQDLGPTYLGMIIKELKGALREGYMLHIRIFTLHTVLRSLEEVYKPPLD
APSLPVPRASLAAGPSPETSSYGNGSDSNAHALRPPLDACLTEIVALLTEDLFGEAAGAK
EAEAEVKSATIKEAKGQKALDGLEILSRLLLFRPTYAVACPEDPGALSSVHALVKPFLLQ
LHDSESPRMHGRVNEALQRVVAGLSVNPSLKAEEVLLYVYGLISPFVLSEDEDEEESGGL
DGQEPEAEASESEVDEEDDLQVIGKAAVKATEAPKPDLHRPKKEVPSWLPVDGTLKLAVE
AKQVQRMAAREEIRVLDGKNAPKLTGWGRHGTKARRAEGGMFGSPAALAAGVLGLRLLHS
YLKRLGQPSEELIPVLDPYVGLLARCVRRRVNDSIVLLSLKCLALMLRHLSSLPSLTFLT
PRLVRSSLSLLSMAGGPANSRDEIVQSCLRILTILIAASGNSIEDDAPLGPLGLTQPEKR
PSLPIPTKSLGALVCLLRAAALDYDHVNAPFALVRALVARRAMVPEMYDLMEQMLGIAVT
SRRPTVRQMGGQIIVSFLLHYPLSSVKVAGFLQQAVRNLDYEYAEGRMAAFGLLQTLIMK
LQVSMLNEHAQVVFFPMVLRLVNDPCPKTRAAAADAISALLRRVSGDVFNTLLDYQCRWM
RMHVENEGLARAAAQAVGLFVDSRPDLFKRGGEDGLGMELLLLFSDTLASVEKRGPVPDV
QADGLESPHEREGEAALGWEMAYHCLGTISRIYARLPGMVESFLHGFPEGMTLLSATSEI
LCYRHAWIDRPSLAPELSLRAVKSLVFLTSAMVHTELELEHGGGSPVRADAALEGEEEDV
GGGESEVGVQEKGDAPKDLLSWIFHRLSYMARRKGEDRRCAVFQFFAAVTTLEGQAVVER
FLPHMLSPLYRATSDGQAEASAHGNDAVELAKEVTALIEEKAGATAFLKAFSDVQKQATQ
KRASRKQARAVEAITDPGAAAQRKLAKNVMKRETIKRKKGKYREIRGGAPPGERASKRQR
SVGEGNKDEGM
NT seq 3456 nt   +upstreamnt  +downstreamnt
atggccgatagcgagatgggtggggcaatgcagaatggaagggaggacaagggaggcggg
aaggcggaggacgaggcagagggtgtgagagagagatccatctccaatccgcccacggat
gcgctcaaaaaagacgtgatttggcgcgctgtcacaacacagctgcttcctagcctacgc
ggactacttctcaaggacagcaaggacaaggagggagggaagcagaaagtcctgcgtgcg
cccatggccctcgccctcctgaaactcatcaagatgcttccccggaccagctacgagcag
gaattgacgcggctctttatgtcggtctgcggaactctccgtagtcgtgactcgaacgtc
cgcgatgccgccagggaggtccttgccaagatggcccaagacctgggaccgacctactta
ggcatgatcatcaaagagcttaagggggcgctgcgggaaggctacatgctgcatattcgt
atctttacgctgcacacggtcctacgctccttggaggaggtgtacaaacctcctctcgat
gctccgtccctgccagtacctcgtgccagcttggcagcgggcccctcccctgagacgagc
tcttacggcaatgggagcgacagcaatgcccacgccctgcggcctcccttggatgcctgc
ttgaccgaaattgtggcgctcttgaccgaagacttgttcggggaggcagcgggggcgaaa
gaggcggaggcggaggtgaaaagcgcaaccatcaaagaggccaaggggcagaaggcactg
gacgggctagaaatcctctcgcgcctcttgcttttccggcccacctatgccgtggcttgt
cctgaggacccgggggctctttcgtccgtccatgccctggtcaagccattcctactgcag
ctgcacgactcggaatccccccgtatgcacggacgcgtcaacgaagcccttcaacgggtg
gtggctgggctgtctgtgaatcccagcctgaaggcagaagaggtcttattgtacgtgtac
ggcttgatttctcccttcgtcctgagcgaggacgaggacgaggaggagagtggcgggctg
gacgggcaagagccggaggcggaggccagtgagagcgaggttgatgaggaagatgatctg
caggtgattggaaaagcagcagtgaaggcgacggaagctccgaagccagacctgcatcgg
cccaagaaggaggtgccaagctggctgcccgtggacgggacgcttaagctagcagtggaa
gccaagcaagtccagcggatggctgcaagggaggaaatccgcgttttggatggaaagaat
gccccgaagctcacaggctggggccgacacggtaccaaagcacggcgtgccgagggcggc
atgttcggttctccggcagccttggcggcgggagtcttgggcttgcgcttgttgcattcg
tatctgaaacgactgggacagccctctgaggagctcattcccgttttagacccctacgta
ggtcttcttgcccgctgtgtccgccgaagagtgaacgatagcatcgttcttctctcgctc
aaatgcctcgctcttatgctccgacacctatcctcgctaccgtccttgacattcttgacg
ccacgtcttgttcgctcttcgctcagtcttctcagcatggccggagggcctgcaaactcc
cgggacgagattgtgcagtcttgcttgagaatcctcaccatcctgattgcggcctcgggg
aacagcattgaagacgacgcgccgctgggaccactgggcctcactcagccggaaaaacgg
ccgtcgctcccgatccccaccaagagcctcggcgccctcgtctgtttgctccgtgctgcc
gctttggattacgaccatgtcaacgcacctttcgcgctcgtccgggctttagtcgctcgt
cgggccatggtccctgagatgtacgacctgatggagcaaatgctgggaatcgcggtgact
tcccgtcggccgacagtccggcaaatgggcggtcaaatcattgtctccttcctcttgcac
taccccctcagctcagtcaaggtcgcggggtttctgcaacaggcagtgcggaacctggac
tatgaatatgcggaaggtcgaatggccgccttcggtcttttgcaaactttaatcatgaaa
ctgcaggtgtccatgttaaacgagcacgctcaggtggtgtttttccccatggtcctgcgt
ttggtgaatgacccttgtcccaagacgagggcagccgcggcagatgccataagtgcgctg
ctgcgccgggtctcaggagatgtgttcaacaccttgcttgattaccaatgtcggtggatg
cgaatgcacgtggagaatgaagggctcgcacgtgcggcagcgcaggcagtggggctgttc
gtggacagccgacccgatttgttcaagcggggaggggaggacggtctaggcatggagctc
ttgctccttttttctgacaccttggcctcggtggaaaagcgagggcccgtaccagacgtg
caggcggatggcttggagagcccccatgagcgagagggggaggcagccttggggtgggag
atggcataccactgcctcgggacgataagcaggatttatgcgaggctccctggcatggtg
gagagctttttgcacggctttcccgagggaatgacgctcttgtccgccacgtcagagatt
ttgtgctaccgtcacgcctggatcgaccgcccttctttagctccagaattgagcctgcgc
gcagtcaagagcttggtatttctcacctcagccatggtgcatacagagctggagcttgaa
catggaggagggagccccgtgcgggcggacgcagccctagagggggaagaggaagacgtg
ggtggcggggagtctgaggtcggcgtccaggaaaaaggggacgcacccaaagatttactc
tcgtggatctttcatcggctttcgtacatggcacgacgcaagggagaggatcggcgttgc
gcggttttccagttctttgccgccgtgaccacattggagggccaggccgtggtcgaaagg
ttccttccgcacatgctgtctccattgtacagggcgaccagtgacggacaagcggaagcg
agcgcccacgggaacgacgcagtggagttggcgaaagaggtgaccgcgttgatcgaagag
aaagcgggagccacggcgttcctgaaggcgttctctgatgtacagaaacaggcgacacag
aaaagggcgagccggaaacaagcgcgggcggtggaagcaatcacagaccctggggcggcg
gcccaacgaaaactggcaaagaacgtcatgaaacgggaaacaatcaagaggaagaaaggg
aagtaccgagaaattcgggggggagcgccgcccggagaaagggcctcgaagagacagcgc
tcggtgggagagggaaacaaggatgagggcatgtaa

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