Nannochloropsis gaditana: NGA_0480900
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Entry
NGA_0480900 CDS
T02917
Name
(RefSeq) hypothetical protein
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
ngd
Nannochloropsis gaditana
Brite
KEGG Orthology (KO) [BR:
ngd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ngd03009
]
NGA_0480900
Ribosome biogenesis [BR:
ngd03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
NGA_0480900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20
UTP20_C
HEAT
HEAT_Maestro
TPR_Trm732_C
TOR1L1_N
Npa1
Tti2
Motif
Other DBs
NCBI-GeneID:
17360628
NCBI-ProteinID:
XP_005853855
LinkDB
All DBs
Position
Unknown
AA seq
1151 aa
AA seq
DB search
MADSEMGGAMQNGREDKGGGKAEDEAEGVRERSISNPPTDALKKDVIWRAVTTQLLPSLR
GLLLKDSKDKEGGKQKVLRAPMALALLKLIKMLPRTSYEQELTRLFMSVCGTLRSRDSNV
RDAAREVLAKMAQDLGPTYLGMIIKELKGALREGYMLHIRIFTLHTVLRSLEEVYKPPLD
APSLPVPRASLAAGPSPETSSYGNGSDSNAHALRPPLDACLTEIVALLTEDLFGEAAGAK
EAEAEVKSATIKEAKGQKALDGLEILSRLLLFRPTYAVACPEDPGALSSVHALVKPFLLQ
LHDSESPRMHGRVNEALQRVVAGLSVNPSLKAEEVLLYVYGLISPFVLSEDEDEEESGGL
DGQEPEAEASESEVDEEDDLQVIGKAAVKATEAPKPDLHRPKKEVPSWLPVDGTLKLAVE
AKQVQRMAAREEIRVLDGKNAPKLTGWGRHGTKARRAEGGMFGSPAALAAGVLGLRLLHS
YLKRLGQPSEELIPVLDPYVGLLARCVRRRVNDSIVLLSLKCLALMLRHLSSLPSLTFLT
PRLVRSSLSLLSMAGGPANSRDEIVQSCLRILTILIAASGNSIEDDAPLGPLGLTQPEKR
PSLPIPTKSLGALVCLLRAAALDYDHVNAPFALVRALVARRAMVPEMYDLMEQMLGIAVT
SRRPTVRQMGGQIIVSFLLHYPLSSVKVAGFLQQAVRNLDYEYAEGRMAAFGLLQTLIMK
LQVSMLNEHAQVVFFPMVLRLVNDPCPKTRAAAADAISALLRRVSGDVFNTLLDYQCRWM
RMHVENEGLARAAAQAVGLFVDSRPDLFKRGGEDGLGMELLLLFSDTLASVEKRGPVPDV
QADGLESPHEREGEAALGWEMAYHCLGTISRIYARLPGMVESFLHGFPEGMTLLSATSEI
LCYRHAWIDRPSLAPELSLRAVKSLVFLTSAMVHTELELEHGGGSPVRADAALEGEEEDV
GGGESEVGVQEKGDAPKDLLSWIFHRLSYMARRKGEDRRCAVFQFFAAVTTLEGQAVVER
FLPHMLSPLYRATSDGQAEASAHGNDAVELAKEVTALIEEKAGATAFLKAFSDVQKQATQ
KRASRKQARAVEAITDPGAAAQRKLAKNVMKRETIKRKKGKYREIRGGAPPGERASKRQR
SVGEGNKDEGM
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggccgatagcgagatgggtggggcaatgcagaatggaagggaggacaagggaggcggg
aaggcggaggacgaggcagagggtgtgagagagagatccatctccaatccgcccacggat
gcgctcaaaaaagacgtgatttggcgcgctgtcacaacacagctgcttcctagcctacgc
ggactacttctcaaggacagcaaggacaaggagggagggaagcagaaagtcctgcgtgcg
cccatggccctcgccctcctgaaactcatcaagatgcttccccggaccagctacgagcag
gaattgacgcggctctttatgtcggtctgcggaactctccgtagtcgtgactcgaacgtc
cgcgatgccgccagggaggtccttgccaagatggcccaagacctgggaccgacctactta
ggcatgatcatcaaagagcttaagggggcgctgcgggaaggctacatgctgcatattcgt
atctttacgctgcacacggtcctacgctccttggaggaggtgtacaaacctcctctcgat
gctccgtccctgccagtacctcgtgccagcttggcagcgggcccctcccctgagacgagc
tcttacggcaatgggagcgacagcaatgcccacgccctgcggcctcccttggatgcctgc
ttgaccgaaattgtggcgctcttgaccgaagacttgttcggggaggcagcgggggcgaaa
gaggcggaggcggaggtgaaaagcgcaaccatcaaagaggccaaggggcagaaggcactg
gacgggctagaaatcctctcgcgcctcttgcttttccggcccacctatgccgtggcttgt
cctgaggacccgggggctctttcgtccgtccatgccctggtcaagccattcctactgcag
ctgcacgactcggaatccccccgtatgcacggacgcgtcaacgaagcccttcaacgggtg
gtggctgggctgtctgtgaatcccagcctgaaggcagaagaggtcttattgtacgtgtac
ggcttgatttctcccttcgtcctgagcgaggacgaggacgaggaggagagtggcgggctg
gacgggcaagagccggaggcggaggccagtgagagcgaggttgatgaggaagatgatctg
caggtgattggaaaagcagcagtgaaggcgacggaagctccgaagccagacctgcatcgg
cccaagaaggaggtgccaagctggctgcccgtggacgggacgcttaagctagcagtggaa
gccaagcaagtccagcggatggctgcaagggaggaaatccgcgttttggatggaaagaat
gccccgaagctcacaggctggggccgacacggtaccaaagcacggcgtgccgagggcggc
atgttcggttctccggcagccttggcggcgggagtcttgggcttgcgcttgttgcattcg
tatctgaaacgactgggacagccctctgaggagctcattcccgttttagacccctacgta
ggtcttcttgcccgctgtgtccgccgaagagtgaacgatagcatcgttcttctctcgctc
aaatgcctcgctcttatgctccgacacctatcctcgctaccgtccttgacattcttgacg
ccacgtcttgttcgctcttcgctcagtcttctcagcatggccggagggcctgcaaactcc
cgggacgagattgtgcagtcttgcttgagaatcctcaccatcctgattgcggcctcgggg
aacagcattgaagacgacgcgccgctgggaccactgggcctcactcagccggaaaaacgg
ccgtcgctcccgatccccaccaagagcctcggcgccctcgtctgtttgctccgtgctgcc
gctttggattacgaccatgtcaacgcacctttcgcgctcgtccgggctttagtcgctcgt
cgggccatggtccctgagatgtacgacctgatggagcaaatgctgggaatcgcggtgact
tcccgtcggccgacagtccggcaaatgggcggtcaaatcattgtctccttcctcttgcac
taccccctcagctcagtcaaggtcgcggggtttctgcaacaggcagtgcggaacctggac
tatgaatatgcggaaggtcgaatggccgccttcggtcttttgcaaactttaatcatgaaa
ctgcaggtgtccatgttaaacgagcacgctcaggtggtgtttttccccatggtcctgcgt
ttggtgaatgacccttgtcccaagacgagggcagccgcggcagatgccataagtgcgctg
ctgcgccgggtctcaggagatgtgttcaacaccttgcttgattaccaatgtcggtggatg
cgaatgcacgtggagaatgaagggctcgcacgtgcggcagcgcaggcagtggggctgttc
gtggacagccgacccgatttgttcaagcggggaggggaggacggtctaggcatggagctc
ttgctccttttttctgacaccttggcctcggtggaaaagcgagggcccgtaccagacgtg
caggcggatggcttggagagcccccatgagcgagagggggaggcagccttggggtgggag
atggcataccactgcctcgggacgataagcaggatttatgcgaggctccctggcatggtg
gagagctttttgcacggctttcccgagggaatgacgctcttgtccgccacgtcagagatt
ttgtgctaccgtcacgcctggatcgaccgcccttctttagctccagaattgagcctgcgc
gcagtcaagagcttggtatttctcacctcagccatggtgcatacagagctggagcttgaa
catggaggagggagccccgtgcgggcggacgcagccctagagggggaagaggaagacgtg
ggtggcggggagtctgaggtcggcgtccaggaaaaaggggacgcacccaaagatttactc
tcgtggatctttcatcggctttcgtacatggcacgacgcaagggagaggatcggcgttgc
gcggttttccagttctttgccgccgtgaccacattggagggccaggccgtggtcgaaagg
ttccttccgcacatgctgtctccattgtacagggcgaccagtgacggacaagcggaagcg
agcgcccacgggaacgacgcagtggagttggcgaaagaggtgaccgcgttgatcgaagag
aaagcgggagccacggcgttcctgaaggcgttctctgatgtacagaaacaggcgacacag
aaaagggcgagccggaaacaagcgcgggcggtggaagcaatcacagaccctggggcggcg
gcccaacgaaaactggcaaagaacgtcatgaaacgggaaacaatcaagaggaagaaaggg
aagtaccgagaaattcgggggggagcgccgcccggagaaagggcctcgaagagacagcgc
tcggtgggagagggaaacaaggatgagggcatgtaa
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integrated database retrieval system