Nannochloropsis gaditana: NGA_0524000
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Entry
NGA_0524000 CDS
T02917
Symbol
SAP18
Name
(RefSeq) histone deacetylase complex subunit SAP18
KO
K14324
histone deacetylase complex subunit SAP18
Organism
ngd
Nannochloropsis gaditana
Pathway
ngd03013
Nucleocytoplasmic transport
ngd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ngd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
NGA_0524000 (SAP18)
03015 mRNA surveillance pathway
NGA_0524000 (SAP18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngd03019
]
NGA_0524000 (SAP18)
03036 Chromosome and associated proteins [BR:
ngd03036
]
NGA_0524000 (SAP18)
Messenger RNA biogenesis [BR:
ngd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
NGA_0524000 (SAP18)
Chromosome and associated proteins [BR:
ngd03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
NGA_0524000 (SAP18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
17362748
NCBI-ProteinID:
XP_005855975
LinkDB
All DBs
Position
Unknown
AA seq
138 aa
AA seq
DB search
MSSGAGARIGVGGNSDGLIDREKVTPSLLRVFWKEHGHNSDLDYGRDGKQLPGRQLHFYT
WPDATLKELSQLLKDVVPCARRRGSRMEFSLVYPGPEGRTRMRMVGSVRNSGRSPEDAKT
LRDCKYQIGDHLDIAVED
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtggagcaggtgcgcgtatcggcgtcggggggaattctgatggcttgatagac
cgggagaaggtcacgccctcgttactccgcgtcttctggaaagagcatgggcataatagc
gaccttgactatgggcgggatgggaaacaactcccgggacggcagctgcatttttacaca
tggcccgacgccaccttgaaggagctaagccagctcttgaaagacgtggtgccttgcgcc
cgacgccgcggctctcgcatggagttctcgttggtatacccagggccggaggggaggacg
cggatgcggatggtggggtcggtgcggaacagcggtcgcagccccgaggacgcgaaaacc
ttgcgagactgcaagtaccagattggcgaccatctcgacattgcggtggaggactaa
DBGET
integrated database retrieval system
