KEGG   Nannochloropsis gaditana: NGA_0587900
Entry
NGA_0587900       CDS       T02917                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
ngd  Nannochloropsis gaditana
Pathway
ngd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ngd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NGA_0587900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ngd03041]
    NGA_0587900
   03400 DNA repair and recombination proteins [BR:ngd03400]
    NGA_0587900
Spliceosome [BR:ngd03041]
 Complex B
  Other components
   Prp19 complex
    NGA_0587900
 Complex C
   Prp19-CDC5 complex
    NGA_0587900
DNA repair and recombination proteins [BR:ngd03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    NGA_0587900
SSDB
Motif
Pfam: ORC5_C Myb_Cef AAA_16 AAA_22 ORC5_lid
Other DBs
NCBI-GeneID: 17362581
NCBI-ProteinID: XP_005855807
LinkDB
Position
Unknown
AA seq 1078 aa
MFSFITGNGRKRARGSARSFFGSEVGKTEDGASSGSTSSDPKATDLPQFNKDNARQHLSD
IEKKRQESIRENQEFLKQLGLKDVKLSLRDASPADPNPPTESVRSLSHPHDSAMSIGASS
SPVPPTLEQVKAKWVGRGAQIDALALLLPSPGEASPSSSVILVHGPSGGGKTGVVADVLR
ALQLPHAHIRGVEHPTARSLYSTIAAAWLRHLESQSRVCGYQDLGYVEEDDWVDEDAQQV
EKARAAEAQGRRRGVTSELSVKREGKAERWVRGGWEEGEGEKEDSVRGHFSEEEGSADDN
SQEEKEEGEEEEEEEEEEEEEEDPYFAQRSSVLEGSEGRGLEAGLMPLPHRCATMAGLLH
LLRSWRGQGSRGQRAGPEGPDKTPFVVVLDSADRLPGGVGSVRHELLELPSMLEGPKGRR
RDWGQGGTASRVALSVVLVAEAPESVPGALEGGAALHLPFPAYTKAQATEILLRSLRAAA
GVSPFLPHGGGGMVREEEKAVEALMKDLVTMLVASLYSSTRDVREMRRMAVLLSERYLAP
VLSEGACGGGENGTQGDAGEPGRPRGGGGGGKGGRGAFGHLDLFEHVRPLLHRATHSCLH
MPAVLAPGLEAGPAPVGSVLSRDPAGWDGHRLEGPRPSSSPPARPPPRALLRYELPKLAL
YLLLAAFLASHLPPDTDMHLFALPSARGGRRTHRSAASATRVAEAKDAEARKEGVRAFSL
ERLLSIFTCLIALSRTTGAAYANNTGTTELFAQINTLVXXXXXXXXAELARRSAVLKRGL
PRPRIVDPDMFASRVRAATAEADEIAAADAMVQQELLAVLRAEAAKYPVREAGGKGNGRS
SKGTDGDRGVLPIIPPQMLSTARDLVAEEAAKLRKAVDSYGGEGGSEESGKGEGAGVDSQ
GDMCPVALERDWLKGYNDLAYFPGRQAFGRLTGASKQDRLAAVVHEFNTLAGHVEKVGKR
ASKLDTRLNLATGGYVKRATALLHGVSEALDQIDEMRLEVGCFRRLKAMEEKALVTRVAE
VNAQADSVAKREEQLQLSYVELLDERDRLFGVLHGHEGEEDRGEEHNGLNGKVTVAEE
NT seq 3237 nt   +upstreamnt  +downstreamnt
atgttctcgtttatcacgggaaatgggaggaaaagagcacgcggaagtgcacgcagtttc
ttcgggagcgaggtggggaagacggaggacggcgcaagttctggcagcactagcagcgac
ccgaaggccaccgacctccctcaattcaacaaggataacgcacgccagcacctctctgat
atcgagaagaaacgccaggagagcattcgtgaaaatcaggagttcctgaaacaacttgga
ctcaaggatgtgaagctcagtctgcgcgacgcctcaccggcagaccccaaccccccaacc
gagagcgtgcgctctctcagccatcctcacgactcggccatgtctattggcgcctcttct
tcgccagtgccgccaacattggagcaagtgaaagccaaatgggtggggcgtggggcgcaa
atcgacgcgttggccctcctcctcccgtccccaggcgaggcgagcccgtcctcctcagtc
atcctggtgcatgggccgagcgggggggggaagactggcgtggtcgccgacgtcctccgc
gcgttgcaactgccccacgcgcacatccgtggggtggagcatccgactgcccggtcactg
tacagtacgatcgccgcggcatggttgagacacctggaaagccagagtcgggtctgtggc
taccaggacctcggttatgtggaggaggacgactgggtcgatgaggacgctcagcaggtg
gagaaggcgcgcgctgccgaagcgcagggcagacgacgcggggtcacaagcgagctttcc
gtcaaaagggaagggaaggcagaaagatgggtgagagggggatgggaggaaggggaggga
gagaaggaggacagcgtgcgaggccatttcagtgaagaggagggcagcgccgatgataac
agtcaggaggaaaaagaggagggagaggaggaggaggaagaggaggaggaagaagaggag
gaggaagacccgtatttcgcgcagaggagctcggtgctggaaggctccgagggcaggggc
ctggaggcggggctgatgcccttgccccatcgctgtgcgaccatggcgggacttctgcac
ctgctgcgatcctggcggggacaggggtcgcgtgggcagcgggcgggccccgagggtccg
gacaaaacgcccttcgtggtggtgttggactcggcggaccgcctccccggcggtgtgggc
tcggtgcgtcacgagcttctggagctcccgtcgatgctggaagggcccaagggccggcgg
agggactggggccagggtgggaccgcctcgcgcgtcgctctctcggtggtgttggtcgcg
gaagcgcccgagtcggtgccgggggccttggaggggggtgccgccctccatttgcccttc
cccgcctataccaaggcgcaggcgacggagatcctgctccgaagcttgcgggcggccgca
ggggtttcccctttccttcctcacggcggggggggtatggtgagggaggaggagaaggca
gtcgaggcccttatgaaggacctcgtgaccatgctggtcgcctcgctgtactcctccacg
cgcgacgtaagggagatgcggcgcatggctgtcttgctctctgagaggtacttggcaccc
gttctcagcgaaggcgcttgtggagggggggagaacggaacgcagggggacgcaggcgag
ccgggccgaccccgaggaggaggcggaggagggaaaggagggagaggcgccttcggccac
ctggacctcttcgagcacgtgcgacccctcctccaccgggccacgcacagctgtctgcac
atgcccgccgtgctcgcgcccggccttgaagcggggcccgcgcctgtgggatcggtcctg
agtcgcgatcccgccggctgggacgggcaccgcctcgaggggccccggccctcctcctcg
ccgcccgctcgcccgcctcctcgcgccctcctccgctacgagctccccaagctggcgctt
tacctcctccttgcggccttcctggcctcccacctcccccccgacacagacatgcacctc
ttcgccctcccctccgcacgcgggggacgacggacccaccgaagcgccgcgagcgccacc
cgggtggccgaggcgaaggatgccgaggcgcggaaggagggcgtgcgcgccttctctctc
gaacgacttctctccatcttcacctgcctgatcgccctcagtcggaccaccggcgcggcc
tacgccaataacacgggcaccacagagctcttcgcgcagatcaacacgctggtcannnnn
nnnnnnnnnnnnnnnnnngcggagctggcacgacggtccgcggtcttgaagcgggggctg
ccccggccacgaattgtggacccggacatgttcgcatctcgggtccgggccgcgacagcc
gaggctgacgagatagcggccgcggacgcgatggtgcagcaagaattgttggctgtgttg
cgcgcggaggcggccaagtatccggtcagagaggcgggggggaaaggaaatggaagaagc
agtaagggaacagacggggacaggggggtccttcccatcataccaccgcaaatgttgagc
actgcgcgtgatcttgtggcagaagaagcggcgaagctccgaaaggcagttgattcttac
ggaggggagggtggaagcgaggaaagtggaaagggcgaaggggcgggtgtcgactcgcag
ggggacatgtgcccagtggcattggagcgagactggctgaaaggatacaacgatcttgcg
tactttcctggccgccaggcatttgggaggctgacaggcgccagcaagcaggatcggctg
gccgcagttgtccacgaattcaataccttggccggtcacgtggagaaggttgggaaaagg
gcgagcaaactcgatacacgcttaaatctggccactggtggctatgtgaaacgcgcaaca
gcgttgttgcacggtgtgagcgaggccctagaccagatagatgagatgcgtttggaggtg
ggatgttttcgcaggctgaaggccatggaagagaaggcgcttgtgacacgcgtggccgag
gtaaatgcgcaggcagacagtgtggccaagcgggaagagcaattgcagctgtcttacgtg
gagttgctcgacgaaagggatcgattgtttggagtgcttcatgggcacgaaggcgaggaa
gatagaggggaggagcacaatggtttgaacggcaaagtgacagtggcggaagagtga

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