Nannochloropsis gaditana: NGA_0612900
Help
Entry
NGA_0612900 CDS
T02917
Symbol
TOP3
Name
(RefSeq) DNA topoisomerase III
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ngd
Nannochloropsis gaditana
Pathway
ngd03440
Homologous recombination
ngd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ngd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NGA_0612900 (TOP3)
03460 Fanconi anemia pathway
NGA_0612900 (TOP3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngd03032
]
NGA_0612900 (TOP3)
03400 DNA repair and recombination proteins [BR:
ngd03400
]
NGA_0612900 (TOP3)
Enzymes [BR:
ngd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NGA_0612900 (TOP3)
DNA replication proteins [BR:
ngd03032
]
Eukaryotic type
DNA Topoisomerases
NGA_0612900 (TOP3)
DNA repair and recombination proteins [BR:
ngd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
NGA_0612900 (TOP3)
FA (Fanconi anemia) pathway
NGA_0612900 (TOP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
17362388
NCBI-ProteinID:
XP_005855616
LinkDB
All DBs
Position
Unknown
AA seq
870 aa
AA seq
DB search
MVAEKPSICNAIANALCAGAEMSTRGRSPPVHEFHGRFEGQSARIRVTSVTGHVFSTDFP
GQYSNWEAVDPVDLFKAPTRKEPTSKFITHHLASEGKGADILVLWLDCDREGENICFEVI
ECMQPGFKAHTRILRAHFSAITPKDIHRALQKLGVPNKDEALSVDARQELDLKVGVAFSR
FQTRYFQGKYGDLDATLVSYGPCQTPTLGFCVQRHDEIQSFSPEKFWYLAAAVAKDGANV
ALEWGRGRVFDHEVAHVFLHLVGEAGSVAVDKVQKSEQRRTKPTALNTVELLKEASKVLG
MGPAQTMSVAERLYLSGYLSYPRTESTAYPESFDVRGALSLQVSHPTWGDYAKGLLQEGV
SRPRAGVDAGDHPPITPVRALDPTEFPGDMGRLYDLVTRHFLASLSHDARFLQTKVLFSS
ECGESFSASGKIMIDPGYLAVLAQSKDESKLPDFQEGDHFTFSSLGLGDGHTSPPGYLTE
SELIERMEKHGIGTDASISSHINNIVERNYVHVGDGRTLIPNPLGDCGNILGIVLVHGYL
RIDADLVLPKVRAQIESECTLIAKGQADMQSVVDHSLRNFEAKFRYFAEHIDLMDSLFEA
TFSPLAATGKPLSRCGKCRRFMKYIHLKPQRLYCPICNETYALPQNGTIKLYKELKCPLD
DFELLLFSLGNAQGAQGKSFPLCPYCYSHPPFEGLSIMGCDSCMHPTCKHSLTRNGVCPC
PGESGAACPGTLVLDVNSYPNWKMACNRCNNLVLFKVTGGNIHSIKPATSQYCEVCGSAV
LTIEYQKDKSPLSGEEGRFCAGGETKIEGCVLCHDILNTCTELAKGRHKHVAIARKDFAK
RNRGRGRGRGRGRGRGGKGGANPLMSFEDF
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggtggctgaaaagccgtccatctgcaatgctattgccaatgccctctgtgcaggggcg
gaaatgagtacgagaggacgctcacctccagtgcacgaattccacgggcgcttcgaagga
caatcagcacgtataagggtcacatccgtgacggggcacgttttctcgacggacttcccc
ggacagtacagcaattgggaggccgtggacccggtcgacttgttcaaagcccccactcgg
aaggagccgacgagcaaattcatcacccatcacttggcatcggagggaaaaggggcagat
atccttgtgctctggctggattgcgacagagaaggcgaaaacatctgctttgaggtcatc
gagtgcatgcaaccggggttcaaggctcacacgcgcattctgcgggcacatttctcagca
atcacgccgaaagacattcaccgtgctttacagaaattaggcgtgcccaacaaagatgaa
gccctctcggtggatgcgcgccaagagctagatttgaaggtcggagtcgccttctcacgc
ttccagacacgttattttcagggtaaatatggggatctggacgcaactttggtctcgtac
gggccttgtcagacgccgaccttgggcttctgcgtccagcggcatgacgagattcaatcc
ttcagcccggagaagttttggtacctggcagcagcggtcgcgaaagacggggctaacgta
gcgcttgaatggggccgcgggcgtgtgtttgaccacgaagtggcccatgtcttcctccac
ctcgtgggggaggcgggctctgtcgctgtcgataaagttcagaagtccgagcaacgacgc
accaaacccaccgccctcaacacggtggaactcctgaaagaggcctccaaagtgctgggc
atgggccctgcgcagacaatgtccgtggcagagcgactctatctctctggttatctgtcc
tacccacggaccgagtccaccgcctatccggagagcttcgacgtccgcggtgcgctgagc
ttgcaggtttcccacccgacctggggagactacgccaaagggttgctccaagaaggcgtg
tctcggccgcgcgcgggcgtggacgcgggagaccacccgccaatcacgcctgtacgggcc
ttggatcccacggaatttcctggggacatgggacggctctacgacctggtcacgcgccat
ttcttggcaagcttgtcgcatgacgcccgctttctccagactaaagtcctcttctcctcg
gaatgcggggagtccttcagtgcctccggaaagatcatgatcgaccctggctatctcgct
gtgctcgcacagtctaaggatgagagcaagctgccggattttcaagaaggggaccatttt
acattctcctcgttggggcttggcgacggccacacgtctccaccggggtacttgaccgaa
agcgaattgatcgagagaatggaaaagcatggcatcggaacagacgcttcgatttcctcc
cacatcaacaacatcgtggaacgcaactacgtgcacgtcggtgatggtcggaccctgatt
cccaacccgctcggtgattgcggcaacattctaggcattgtcctcgtgcatggatacctt
cggatcgacgccgatcttgtcctccctaaggtgcgggcacaaattgagagcgaatgcacc
ctcatcgccaaggggcaggcggatatgcagagcgtcgtggaccattctctgcggaacttc
gaagcgaaattccgctatttcgccgagcacattgacctgatggactcccttttcgaagcg
acttttagccctctggcggcgacaggcaagcccttgtctagatgtggaaaatgcagacgc
tttatgaagtacatccacctgaaaccgcaacgcctgtactgtcccatttgcaatgaaacg
tacgccttgcctcagaacggcactatcaaattgtacaaggaacttaaatgcccgctcgat
gattttgagctactcttgttttcactcggaaatgctcaaggtgctcagggtaaatctttt
cctctttgcccgtactgttattcccatcctcctttcgaaggcctcagcattatgggctgt
gactcttgcatgcatcctacctgcaagcactccctcacacgaaacggcgtctgcccttgc
cccggcgagagtggagctgcctgtcctggcacgttagtcttagacgtcaactcttaccct
aactggaaaatggcgtgcaatcgctgcaacaatttagtgcttttcaaggtgacaggcgga
aacattcacagtatcaagccagccacgtcccaatactgcgaggtttgtggctccgctgta
ctaacgatcgagtatcaaaaggataaaagccccttatctggtgaggagggacgattttgt
gcgggaggggaaaccaagatagaaggatgtgttctgtgccacgacattcttaacacctgc
accgaactggccaaaggccgacacaagcatgtcgccattgcccgcaaagactttgccaag
cgcaatcgaggacgggggcgtggacgcgggcgaggaaggggccgcggggggaaagggggg
gccaatcctcttatgtctttcgaagatttttga
DBGET
integrated database retrieval system
