Nannochloropsis gaditana: NGA_0688100
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Entry
NGA_0688100 CDS
T02917
Symbol
GLYA
Name
(RefSeq) glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ngd
Nannochloropsis gaditana
Pathway
ngd00260
Glycine, serine and threonine metabolism
ngd00460
Cyanoamino acid metabolism
ngd00630
Glyoxylate and dicarboxylate metabolism
ngd00670
One carbon pool by folate
ngd01100
Metabolic pathways
ngd01110
Biosynthesis of secondary metabolites
ngd01200
Carbon metabolism
ngd01230
Biosynthesis of amino acids
ngd01240
Biosynthesis of cofactors
ngd04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ngd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NGA_0688100 (GLYA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NGA_0688100 (GLYA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NGA_0688100 (GLYA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NGA_0688100 (GLYA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NGA_0688100 (GLYA)
Enzymes [BR:
ngd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NGA_0688100 (GLYA)
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Paralog
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
17360029
NCBI-ProteinID:
XP_005852729
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All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MLATMFLRRGSNTLALGRRMPILRSITSETKSWATSLNEPLKTTDPDLHAIIEQEKVRQR
ESLVLIASENFTSKSVFDALGSVMSNKYSEGYPGARYYGGNENIDKVESLCQQRALAAFN
LDPARWGVNVQTLSGSPANFQAYTAVLAPHDRIMALDLPHGGHLSHGYQTDSKKISAVSI
FFETFPYRLDERTGRIDYDKMEENAALFRPKLLVAGASAYARTIDYERMRKIADKHNAYL
LSDMAHISGLVAAGAIPSPFPHSDIVTTTTHKSLRGPRGAMIFYRKGVRRVTKKGVEIPY
DLEEKINFAVFPGLQGGPHNHTIAALATALKQAASPEFKKYQEQVLQNSKRLAETLTKAG
YSLVSGGTDNHLVLVDLKPQQVDGARVERVMELANMAANKNTVPGDKSALTPGGIRIGCP
ALTSRGFTEEDFEQVGHFFDRAVKIAQEIKRETGPKIKDFKEALREGPGKHQALVDLKKD
VVAFAQKFPTVGF
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcaaccatgtttctccgccgtggaagcaacacactggcgcttggtcgtcgcatg
ccaatactcaggagcatcacctcggagaccaagtcctgggccacctccctgaacgaaccc
ctgaagacgacagacccagacttgcatgccatcattgagcaagagaaagtacgacagcgg
gagtctctggtcctcatcgcctcggagaatttcacgtctaagtccgtcttcgacgcactc
ggctccgtcatgtccaacaagtactcggagggctaccctggcgcccgctactacggcggg
aacgagaacatcgacaaggttgagtccctgtgccagcagcgggccctggccgccttcaat
ctggacccggctcggtggggcgtgaacgtgcagaccctctccgggtcgcccgcaaacttc
caggcctacacggcggtcctggcgccgcacgaccggatcatggctctggaccttccccac
gggggccacctctcgcacggctaccagacggactcgaagaagatctccgcggtctccatc
ttcttcgagaccttcccctaccgcctcgacgagcgcacgggccggatcgactacgacaag
atggaggagaacgccgcgctcttccggcccaagctgctggtggcgggggcctcggcctac
gcgcggaccatcgactacgagaggatgaggaagatcgcggacaagcacaatgcctacctc
ctctctgacatggcccatatctcgggtctggtggcggcgggcgccatcccctcccccttc
ccgcactcggacatcgtcaccaccaccacgcacaagtccctgcggggtccgcggggggcg
atgatcttctaccgcaagggggtccggagggtgacgaagaagggggtggagatcccctac
gacctggaggagaagatcaacttcgccgtcttccccgggctgcagggggggccccacaac
cacacgatcgccgcactggcaacggccctcaagcaggcggcctcccccgagttcaagaaa
taccaggagcaagtgctgcagaacagcaaacggctggcggagacgctgaccaaggccggg
tactccctcgtctcgggcggcacggataaccacctggtcctggtggacctgaagccgcag
caggtggacggtgcgcgcgtggagcgcgtgatggagctggcgaacatggcggcgaacaag
aacacggtccccggggataagagcgccttgacgcccgggggcatccggatcgggtgcccg
gccttgacgagtcgcgggttcacggaggaggatttcgagcaggtgggtcatttcttcgac
cgggctgtgaagatcgcgcaggagataaagagggagacgggccccaagatcaaggacttc
aaggaggcgctcagggagggtccgggcaagcaccaggccctggtcgacctcaagaaggac
gtcgtcgcatttgcccagaagttcccgaccgtgggcttttaa
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