KEGG   Nannochloropsis gaditana: NGA_0692800
Entry
NGA_0692800       CDS       T02917                                 
Name
(RefSeq) smu-1 suppressor of mec-8 and unc-52-like protein
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
ngd  Nannochloropsis gaditana
Brite
KEGG Orthology (KO) [BR:ngd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ngd03041]
    NGA_0692800
Spliceosome [BR:ngd03041]
 Complex B
  Other components
   Complex B specific factors
    NGA_0692800
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_EML ANAPC4_WD40 LisH_TPL EIF3I Beta-prop_CAF1B_HIR1 NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Ge1_WD40 Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_VPS8 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C Beta-prop_IP5PC_F Beta-prop_WDR75_2nd Beta-prop_NUP159_NUP214 WD_LRWD1 Beta-prop_SPT8 Beta-prop_NWD2_C DUF7165
Other DBs
NCBI-GeneID: 17360133
NCBI-ProteinID: XP_005853364
LinkDB
Position
Unknown
AA seq 574 aa
KHILERQSGESRKAFSSSLSAVAFGKSAYDCKPDLLAPALSLGLPIPSRMSSLPTSAASG
VYEVEASDVIKLILQFCKENNLHRTLHTLQSESQVAMNSVDSMENFLSDVTQGRWDSVLP
QAAGLQLPQDKLLALYEQVCLELIEMRETELAREMLRTTEPLQLLKTQDPDRYFRLETFL
NRKIHDAQELYAYGLNKERRRQEIADSLAVEVSVVPPSRLLALLQQALRYQQLQGNLPKD
RRYDLFRGSARSAGKDEAERPPKKQAGQIKFGSKTHPECARFSPDGLQLVTGSLDGFVEV
WDPDTCRLRKDLPYQAREELMMHDAAVLALAFSRDGEMLATGDTDGAVKVWKLSSGKCLR
HLPHAHSKGITSLAFSRDSLQLATASFDGTARLHGVKAGRVLKEFRGHSSFVNCICFTQD
GSRLLTGSSDGTVKVWDARSSECLHTFRPGVESAVDLEAMVHTVLPLPGGADLFFIANRT
STAYVTTAQGQVVKRMSSGKKVGGDFAAAALSPKGTFAHCAGEDGIVYSFQLGKGDLESF
VKVGEKEVIGVAHHPHRNLVVTFGDEGVLKVWRA
NT seq 1725 nt   +upstreamnt  +downstreamnt
aaacatatactagagcgtcaaagcggagagtcgaggaaggcgttcagctcttctttgtct
gccgttgcatttggaaagtctgcatatgactgcaagccggaccttttggccccagcactc
tcactaggcttgccgattccaagcaggatgagtagcctgcccacctccgccgcctcgggc
gtctacgaagtggaggcctcggacgtgatcaaactcatccttcaattttgcaaggaaaac
aatttgcacaggacactccacacccttcagtcggaatcccaggtggccatgaactcggtg
gactctatggagaattttctcagcgacgttacccaaggaaggtgggacagtgttttgcct
caagcggcggggcttcaactaccccaagacaaactgctggcgctctatgagcaggtctgt
ctcgaactcatcgaaatgcgtgaaacggaactggcccgggaaatgttgcgaacgacagag
ccattacagcttttaaaaactcaagacccggaccgttactttcggttggaaacatttttg
aaccgcaagatccacgacgcgcaggagctgtatgcctacggcctcaacaaggagcggaga
cggcaggagatcgccgacagcctcgccgtcgaagtctccgtcgttcccccttcccgcctt
cttgccctcttgcagcaggccttaaggtatcagcaacttcaaggaaacctgcccaaggac
cggcgttacgatctttttcgaggcagcgcccgctccgcggggaaggacgaggcggaacgg
ccccctaagaagcaggcgggccaaatcaaattcggatccaaaacacacccagagtgcgcg
cgtttctcccctgatggcctgcagctcgtcacgggttctttggatggctttgtggaagtg
tgggacccggacacctgccggcttcggaaggacctgccctaccaagcccgggaagaattg
atgatgcacgacgcggcggtcttggccctggcgttctccagggacggagagatgctggcg
acgggggacacggacggggctgtcaaggtatggaaactgagcagtgggaagtgcctccgc
caccttccccacgcccacagcaaaggcattacctccctggcgttttcccgagattccttg
cagctggcgacggcgtcgttcgacgggaccgcgcgcttgcacggggtcaaggcaggcagg
gttttgaaggagttccgggggcactcctcctttgtgaactgcatctgtttcacccaagac
gggagccgcctcttgactggcagcagcgacggcacggtcaaagtgtgggacgcccggagc
agcgaatgcctccacaccttccgaccgggggtggagtccgcggtcgatctggaggcgatg
gtgcatacggtcctgcccttgccagggggagctgacttgttttttatcgccaaccggacc
tccacggcctatgtgacgacggcacaggggcaggtggtgaaaaggatgtcgagcgggaag
aaagtagggggggatttcgccgcggccgccctgagtcccaagggtacttttgcgcattgt
gcgggggaggacgggatagtgtattcttttcagctggggaaaggggatttggaaagcttt
gtgaaggtgggggagaaggaagtgatcggggtggcccaccacccgcaccggaatttggtg
gtgacgtttggggacgaaggcgtgctcaaggtgtggagggcgtga

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