Nannochloropsis gaditana: NGA_2011200
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Entry
NGA_2011200 CDS
T02917
Symbol
TAF1
Name
(RefSeq) transcription initiation factor TFIID subunit 1
Organism
ngd
Nannochloropsis gaditana
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
WSD
WHIM1
Auxin_resp
Motif
Other DBs
NCBI-GeneID:
17362395
NCBI-ProteinID:
XP_005855620
UniProt:
K8Z1Z9
LinkDB
All DBs
Position
Unknown
AA seq
1488 aa
AA seq
DB search
GVAASTTTEVGSKLTSSLGLASAPDIQGWKTVVDQLGRLTFAELPVKTRVMVLRWLADEV
ASSATVRELLENVAGAREPYRKMAARRTAFRAQKAHMAAQQQAAQASGYAPPPSPANLEG
WTQADEREFLRVSELALKDLRLRPLGVDRFHRRYWTFPGDKKHAVYAEDEADGPVTVVYR
SKVDLIALIRWLSDRTLREGALRSRVIELTERYYPDGPDLTQAINVPYSPVPNGEGAVNG
RKSTESADAFCRYQSAYAGVNLPSEQQAMMPDLYRYICYPLGITARERGCLGLVYADQEL
KLTAYRDHRQNLVRTPPFPRMGINVDDRIVLVNGKLIDGPKWPSGAVEDDSTLVHLPGGE
TEEFQLMILREAGGAQTSINVQQLPPRVTCSEWNFVQGWLLHLEREMCHPLAIGPDWEGS
GAKARWRQMVMRALDGEKKKAESLRKAALELEGRLRACGTVLSKEDREGRAKGTGGKWRQ
YMSLAQTPSQLLLGLRLLHSLLDRRVLNRALQSMERAAWQALLPKEKSIELPDVGSFVIY
YPQGHKAAMRHNARFQGPMWNVEGPHEEQNGAAAGAGAVQVCQVHGIEYHAFDPTAKDPF
ASSAWARVKLARLNEPAYHYFYPERKLRLYRPVEPRASLSRLLARVVLSAMELREADQFC
EPVDRNEYPDYYEMIWNPMDFTTLLSRVRRHMYGELSTFLKDLELISRNCHAYCDARFPT
LPVLADQVVGVAKETVKYLEPKIRKAEKEIRVLCERSNFNDVIPYVKKEAPLEEMFVCDR
SKPPGGNRPKNKASGRTTPNAFGDASPSASGHATPVKVEGNGSQSENSEGQGEARPRPFT
ESTAPSTQAASPMVATAPSPLSYPAATAPLVPSAPATEAFPSQASPSIPPPQTAGSFTHA
FPAPANGPTPPSCSSAPAPTPVPAPAPHPSSLPQPQPTPTNTGNSWLPQQHPQQPPPQHQ
PQQHQQYQHQPASQPQQQQYQHQPASQPQQQQVQPPRPVGVPYPGGGPHPTSTSARPAYS
QPSAIPPAPAKPSTSHTPSTAPVSTLAPATGATMPMGPVPGGGPPSVYGTYAGQGARPPP
GPSSGYYNTYSHSYTHPAPPSSAPSTSVAGVQSSAPSPYATGYPYPPSHPHPQAGGESSA
PPSSYAAPGYSYPTYSTGSAPSGATAYPGYHAPRPPPSSTSSSSQPATGTSSTQAAYQYA
HPHPGTATYQHLPPSSAHAPAYRAPAYRHPEHPQQQPPPHQQQQQPQPQRKPQGSPAGTP
AGQHPPQQPPQQMATPKVVETFYVGVWLLNSVPEFMVSRPRYEQALKRTWRKEDRFDACW
SSEDVGEEGSVYSGTVIGARPPDSVTGLLPWTALQMERDSGKVDFVNPWNIDVLPSDGGP
VVPGGKLEYHGMYDLYKHHHSLLDRPRDPEMKDAGLNVLGPRGPGVYAPPSYSYHPQQQA
YQDHPRHPPTDSAAAGAQAQGYAAYPSYPYGAYTGYAYGSVPGGYGYP
NT seq
4469 nt
NT seq
+upstream
nt +downstream
nt
ggggagtcgcggcatccacgacgacggaagtggggagcaagctgacttccagcttaggct
tggctagcgctcccgacatccaagggtggaaaaccgtggtggatcagttggggcgattga
cctttgcagagctgcctgtcaagacccgagtcatggtcctgcgatggctagctgacgagg
tcgcatcctcggccacagtccgagagttgctggaaaatgtggcgggagcccgcgaaccgt
accgaaaaatggcagcacgtaggactgccttccgtgcgcagaaggcacatatggctgcgc
agcaacaagccgctcaggcatctgggtacgctcccccgccaagcccggcaaatttagagg
gttggacacaggcggacgagcgggagttcctgcgcgtgagtgaattggccttaaaagatc
tgaggctgcggcccttgggtgtggaccggtttcatcgccggtattggacgtttccagggg
acaaaaagcacgcggtgtacgcggaggacgaggctgacgggccggtcacggttgtgtatc
ggagcaaggtggacctgattgccttgattcggtggctgtccgaccgcactttaagagagg
gcgccctgcggagccgagtcattgaacttacggagagatattacccggatggtccagatt
tgacccaagctataaacgtcccctattctccagtcccgaacggtgaaggggcggtgaatg
gaaggaaaagcacagagtcagcggacgcattttgtcgctaccagagcgcatacgctggag
tcaatcttccctcagaacaacaagccatgatgcctgacctgtacagatatatttgctacc
ccttagggatcacggccagggagcgaggatgcctggggcttgtctacgctgatcaggagt
tgaaactgacggcgtaccgtgaccacaggcagaatctggtccgcacccctccatttccgc
gaatggggatcaacgtggacgatcgcatcgtcctagtaaatggaaagctgattgatgggc
cgaaatggccctcaggggcagtcgaggacgacagcactctggtccacctgccaggcggag
agacggaggagtttcaactgatgattttgcgagaggcagggggggcgcagacttccatca
acgtccaacagctccctccacgggtgacatgcagcgagtggaatttcgtacaaggctggc
ttttgcatttggaacgggagatgtgtcacccattggccatcggccccgactgggagggaa
gtggagccaaggcacgctggaggcagatggtcatgcgcgcgctggatggggaaaagaaga
aggcggaaagtctgaggaaagccgcgctcgagctggaggggaggttgcgagcatgcggca
ccgtcttgagcaaagaggatagggaagggcgggccaaggggactggggggaaatggcggc
aatatatgagtttggctcaaacgccctcgcagttactcttgggcttgcgactccttcatt
cccttcttgaccggcgtgtcctcaaccgggccttacaatccatggaacgcgcggcgtggc
aggcgctgttgcccaaggagaagagcatcgaacttcccgacgtgggctcttttgtcatct
actacccgcagggacacaaagcagcgatgcgacacaacgcccgctttcaaggccccatgt
ggaatgtggaaggaccgcacgaggagcaaaatggggcggctgcgggagcgggggcagtgc
aggtgtgccaggtgcacggcatcgaataccacgccttcgacccgacggccaaggatcctt
ttgcgtcttctgcttgggcaagagtcaagttggcgcgtctgaacgaaccagcttaccact
atttttaccccgagaggaaacttcgcctgtaccgtcctgtggaaccgcgcgcctcactgt
cccgcctgctggcacgggtggtgttgtctgcgatggagctgcgagaagcggatcaattct
gcgagccggttgacaggaacgagtacccggattattacgaaatgatctggaaccccatgg
atttcacgaccctattgtccagggtccgccggcatatgtatggcgagttgtcaacattcc
tgaaagatctggagctgatatcacgcaattgtcacgcgtattgtgacgcacgcttcccca
ctcttcctgttctcgctgatcaagtagttggggtagcaaaggagactgtcaagtacttgg
agcccaagattcgcaaggcggaaaaggagatccgtgttttgtgcgagcgaagtaatttca
acgacgtcatcccgtacgtgaagaaagaggcgccgctggaagaaatgtttgtctgcgacc
gatccaagcctcctggaggcaaccgtcccaagaacaaggcgtctgggagaacgacaccga
acgcgtttggtgacgcgtccccgtctgcttcaggacatgccacacccgttaaagtggaag
gaaatggcagccaaagtgaaaactctgagggtcaaggagaggcgagaccacggccattca
cggagtccaccgcaccgtcaacacaggcggcctcgcccatggttgccactgctccctccc
ccttatcgtaccctgcggctaccgcccctctcgttccctctgcacccgctactgaagcgt
tcccatcacaagcctccccgtcgatcccaccgccacaaaccgctgggtcgtttacgcatg
cctttccagcgccggctaacgggcccactcccccttcctgttcctctgcgcctgccccca
cccctgtccctgctcctgcacctcacccatcctcgcttccccagccgcaacccacgccga
ccaacaccggaaattcttggctaccgcagcagcatccacaacaacctccaccacaacacc
agccccagcagcatcagcagtatcagcatcaaccagcatcacagccgcagcagcagcagt
atcaacatcaaccagcatcacagccacagcagcagcaggttcagccaccccgtccggtgg
gagtaccgtatccaggcggcggcccccatccaacctcaacttcggcccgccccgcgtatt
cccagccctccgccattcctcctgcgcccgcaaagccctccacttcccacaccccttcca
cggcgcctgtgtcgaccttggcgcccgccactggtgctacgatgcctatgggccccgtcc
ccggaggggggcctcccagtgtctacggcacttacgcggggcagggcgccaggcctcccc
ccggcccaagcagcggctattataacacatactcccactcgtacacccaccccgctcctc
cctcctctgccccttccacctccgtcgcgggtgtacaatctagtgccccttctccctatg
caacaggctatccctaccctcccagtcatcctcatcctcaggccggcggtgagtcctctg
cccccccgtcttcctacgctgcacctggatattcgtatccaacctattcgaccggctcgg
caccctcaggggctaccgcttatccagggtaccatgcccctcgcccaccgccgtcctcca
cctcgtcctcctcccagccggccaccggcacctcgagcactcaagctgcctatcagtacg
ctcatccccaccccgggactgctacttaccagcacctccccccttcctccgcccatgccc
ccgcttatcgcgcccccgcttatcgccatccggagcatccgcagcaacagcccccccccc
accagcagcagcagcagccgcagcctcaacgcaaaccgcaaggaagtccagcagggacac
ctgcgggtcaacatccgccacagcagccaccgcagcagatggcgacaccgaaagtggtgg
agaccttttacgtgggtgtctggcttttgaactccgtgcctgaattcatggtttctcgtc
cacgttacgagcaagctctgaagaggacttggcgcaaggaagatcgcttcgacgcgtgtt
ggtcgtcggaagatgtcggagaggaagggagcgtgtacagcgggacggtgattggggcaa
ggccgccggattcggtcacgggcctcttgccctggacggcactgcagatggagcgggaca
gcgggaaagtggatttcgtgaacccttggaacatcgacgtcttgccctccgacggcggcc
cggtggtgccggggggcaagttggagtatcacggtatgtacgacttgtacaagcaccatc
actccctcttggaccgaccacgagacccggaaatgaaagacgcgggattgaatgtcctag
ggccacggggaccaggggtatacgccccgccttcctactcctaccatccccaacagcaag
cgtaccaagaccatccgcgccacccgccgacagacagcgcagcagccggggctcaggcac
aaggctatgcagcatatccttcttatccctatggagcatatactggatatgcgtatgggt
ctgtgcctggagggtacggctatccgtag
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integrated database retrieval system
