Nannochloropsis gaditana: NGA_2014820
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Entry
NGA_2014820 CDS
T02917
Symbol
APEX2
Name
(RefSeq) AP endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
ngd
Nannochloropsis gaditana
Brite
KEGG Orthology (KO) [BR:
ngd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngd03400
]
NGA_2014820 (APEX2)
Enzymes [BR:
ngd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NGA_2014820 (APEX2)
DNA repair and recombination proteins [BR:
ngd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NGA_2014820 (APEX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
17361818
NCBI-ProteinID:
XP_005855045
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
GVHAASAGLVCCAYERRKGLNDIPSTVAGKACPFECGIFRRIFEEIVHESDNFEAEPVKA
EQKRSAEARRSDGGDAGEEEDYEGCISSAEGILNMIQPEDILRKIDTEGRVVMTDHGHFL
LLNVYAPFNGRPGRARFKKAFNAALLARIIAFTVSGREVVLCGDLNAIADAKDSVERPSE
EELAAAPWARWMRTLLGSRQAALEQAKGGGKSKDSRWEWLPNECMNWESAPSWPLLVDTF
RELHPFRTDAFSCWCNQTAARHTNYGRRIDYILASPGLCGYAEGPGIVAHLEEAAVRQEV
RGSDHCPVTARFSFSKLTDGSYLSLPSPFSERGSGRILLPPLCTGNYPEFRARQAGIHTF
LLKPSLKVATTPYPSGCVDQSFSNDFLHEKLKVCDPLSPSAPSLHASHEARARQGGMQGS
MVKCARTSTIGRKRTKSKSSAAQVPTKSQMTLTHYGIASTRAKGGDESREATEEKMTTGT
SASFVSSKALAREQHSSTLYATKSSSLSSSTMSAPQPGVMLEATRREVFLSAFRSQRDNT
PRCQGHNEPMVRRHVKKADSGNLGRYFFCCARPVGTDGDKEARCRDFLWEDSLAMGAGFR
RVRGLVKKEKPSKTGDV
NT seq
1855 nt
NT seq
+upstream
nt +downstream
nt
cggggtgcatgcggcctcggcgggtttggtgtgctgtgcttatgaacgccggaagggcct
gaatgacatcccgagcacagtggctggcaaagcttgcccatttgaatgcggaatttttcg
acgcatttttgaggagatagtccacgagtcagacaattttgaggccgagccggtcaaggc
tgaacaaaagagaagtgcagaagccagacggagcgatgggggagacgcaggcgaggaaga
ggactacgaaggatgtatttcgtcagctgaaggaattctcaatatgattcagcccgaaga
tatactacgcaaaatagacacagagggacgtgtggtcatgacggaccacggtcatttttt
gcttctgaacgtgtacgccccgttcaatggcaggccgggtcgcgctcgcttcaaaaaagc
attcaatgctgctcttttggctcgtattatcgcattcacggtatcgggacgcgaagtggt
gctttgtggggacctgaacgctatcgcggacgcaaaagactcggtcgagcgtccctcgga
ggaagagcttgcggctgctccatgggcccggtggatgcgcacgctgcttggatcgcgcca
agctgccctagaacaagcaaagggggggggtaaaagtaaggactcgcggtgggagtggct
tccgaatgaatgcatgaattgggagtctgccccgagctggccgcttctggtggacacgtt
tcgcgagctgcaccctttccggaccgacgcgttctcctgctggtgcaatcagacggcagc
gcgtcacacaaattatgggcggcgtatagactacattcttgcgtcaccgggtctgtgcgg
ctacgcagagggtcccggtatcgtcgcccacttggaggaggcggccgtcagacaggaggt
gcgcggcagcgatcattgtccggtgactgcgcgcttctctttctcaaagcttacagatgg
gtcatatctttctttgccctctcctttttcggagcgcggtagcggacgcattcttctccc
cccgctttgcacgggtaactaccccgaatttcgagcccgacaggccggcattcacacatt
tcttctgaagccatcgctcaaagtggccaccactccctatcccagtggttgtgttgacca
aagtttcagcaacgatttcctgcacgaaaagcttaaggtttgcgatccgctatctccgtc
agctccctcgcttcatgcaagccacgaggctagggctcggcagggaggcatgcaaggctc
tatggtgaagtgcgcacgcaccagcacaattgggaggaagcgcaccaaatccaaatcttc
tgcagctcaggtgccgaccaaatcacagatgactctgactcattatggcattgccagcac
cagagccaaagggggggatgagagccgtgaagcgacggaggaaaagatgaccactgggac
gtccgcctcctttgtttcttcgaaagcattagcgcgtgagcaacactcatctactttgta
tgctaccaaatcatcttctctatcttcatctaccatgtcggctccccagcccggtgtcat
gctggaagccacacgacgagaggtctttttgagtgccttccgatcccagagggacaacac
cccacgatgtcagggtcataatgagcccatggtccgacgacatgtcaaaaaggcagatag
tggcaaccttggaaggtattttttctgttgtgcacggcctgtcggcacagatggagacaa
agaagcgcgttgcagagattttctatgggaagacagtttagcaatgggagcaggattccg
gcgtgtccgcggtctggtgaaaaaagagaaacctagcaagacgggcgatgtgtaa
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