Natronobacterium gregoryi: Natgr_1362
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Entry
Natgr_1362 CDS
T02383
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
nge
Natronobacterium gregoryi
Brite
KEGG Orthology (KO) [BR:
nge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nge03016
]
Natgr_1362
Enzymes [BR:
nge01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Natgr_1362
Transfer RNA biogenesis [BR:
nge03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Natgr_1362
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
AFZ72573
UniProt:
L0AF84
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All DBs
Position
complement(1353453..1354514)
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AA seq
353 aa
AA seq
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MSLEGRFDEETGVVTVGSDARQRYHDSRGYGYPTSGNEIALSPVEAAHLLYRGDLEAVVG
EDGDRLDFQSFVAQEPGEAFGVRFLVYADLRERGFYLSPAAEPWIDEPPVGEVDFAVFPR
GKGPGDGEVAYALRVLGERTDVPASELSAGVLAVVDEESEITYFEVDRRDPTGSSDADVT
VSGRCEADLLEDRVVVWDPPVELYERTFYGQPLEGREYDEPTLQCSLLEAASLAAEGAIA
LEPSTVRERGREVEGERFDRRLTVYTELRDRGVVPKTGYKFGADFRTYADVESVDDLGHS
ELLVRVHPADYVFEPRDLALDVRLAHGVRKTMVFALVAGDGTIEWWSLERLTP
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcgagggccggttcgacgaagagacgggcgtcgtcaccgtcggcagcgacgca
cgccagcgctatcacgattcgcgggggtatgggtatccgacttcgggtaacgaaatcgct
ctctcgccggtcgaggcggcacacctcctgtatagaggtgatctcgaggcggtcgtcggc
gaggatggcgaccggctcgatttccagtcgttcgtcgcacaggaaccgggcgaggcgttt
ggggtccggtttctcgtctacgcggacctgcgcgagcgggggttctatctttcgccggcc
gcggagccgtggatcgacgagccgcccgtgggtgaggtcgatttcgcggtgtttccgcga
gggaaggggccgggtgacggcgaagtcgcttacgcgttgcgggtgctcggtgagcgaacc
gacgttcccgcgtcggagttgtcggctggcgttctcgctgtcgtcgacgaggaaagcgag
atcacgtatttcgaggtcgaccgcagggacccgacgggcagttcggatgcggacgttacc
gtttccggtcgctgtgaggccgacctgctcgaggatcgggttgtcgtctgggacccgccc
gtggagctctacgagcggacgttctacggccagccgctggagggccgggagtacgacgag
ccgacgctgcagtgttcgctgctcgaggcggcttctctcgccgcggaaggggcgatcgcc
ctcgagccgtcgacggtccgcgagcggggccgcgaggtcgagggggagcggttcgaccgg
cggctgacggtctacacggaactgcgcgatcgcggcgtcgtccccaagacgggatacaag
ttcggtgccgacttccggacctacgccgacgtcgagtctgtcgacgatctgggccactcg
gaactgctggttcgggtgcatccggccgactacgtcttcgaaccacgggatctggcgctc
gacgtccgcctcgctcacggcgtccgcaagacgatggtgtttgcgctggtcgccggggat
ggcacgatcgagtggtggtcgctcgagagattgacgccgtga
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