Natronobacterium gregoryi: Natgr_1455
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Entry
Natgr_1455 CDS
T02383
Name
(GenBank) single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
nge
Natronobacterium gregoryi
Pathway
nge03410
Base excision repair
nge03430
Mismatch repair
nge03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Natgr_1455
03430 Mismatch repair
Natgr_1455
03440 Homologous recombination
Natgr_1455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nge03400
]
Natgr_1455
DNA repair and recombination proteins [BR:
nge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Natgr_1455
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Natgr_1455
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Natgr_1455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
DUF2529
Motif
Other DBs
NCBI-ProteinID:
AFZ72666
UniProt:
L0AFT4
LinkDB
All DBs
Position
complement(1447046..1448530)
Genome browser
AA seq
494 aa
AA seq
DB search
MAGPIPELEGRATRCARRLCEADRVLLASHIDADGLTSAAIAAQALERAGIPFETVFEKQ
LDEEAIAAIATTDYDTVCFTDFGSGQLDIIGEHEDAGDFTPVVADHHQPADRETEYHLNP
LLFGIDGASELSGAGASYVLARALADISEPEVATDGGTASATARADNRDLAALAVVGAVG
DMQASGGKLEGANEEIVEEGVEAGVLETGKDLTLYGKQTRPLPKLLEYATDVHIPGISND
QAGALQFLEDLDLELKRDGEWRRWSGLTNEEKRTVASALVKRAVSRGVPAKKIDNLVGTA
YVLSEEPVGTELRDASEFSTLLNATARYERADVGLGVCLGNREGALERARTLLRNHRRNL
SAGIDLVTREGVTHEEHIQWFHAGDRIRETIVGIVAGMAMGNDGVSRSKPIVAFAEKSDE
SEDGGEDVELKVSARGTHALVRNGLDLSVVMGEASRAVGGDGGGHDVAAGATVPKGRESE
FLEHADEIAGEQLT
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggcagggccgattcccgaactcgaaggccgggcgactcgctgtgcgcgccgactgtgc
gaggccgatcgcgtgttgctcgcctcccacatcgacgcggacggactgacgagcgccgcg
atcgccgcccaggcactcgagcgtgcggggattccgttcgagacggtcttcgagaaacaa
ctcgacgaagaggcaatcgccgcgattgcgacgaccgactacgacaccgtctgctttacc
gacttcgggagcggccagctcgatatcatcggagaacacgaggatgcgggtgatttcacg
cccgtcgtcgcggaccaccaccagcccgcggatcgggagacggagtaccatctcaaccca
ctcctgttcgggatcgacggcgcttcggaactctcgggggccggcgcgagctacgtcctc
gcacgagcactcgccgacatctcggaacccgaggtcgcgaccgacggcggcaccgcgagc
gcgaccgcccgcgccgacaaccgcgacctcgccgcgctggccgtcgtcggcgctgtcggc
gacatgcaggcctccggcgggaaactcgagggtgcaaacgaagagatcgtcgaggaaggc
gtcgaggccggcgttctcgagaccgggaaagacctcacgctctacgggaaacagacccgg
ccgctgccgaaactgctcgagtacgccaccgacgtccacatccccggcatctcgaacgac
caggccggtgccttgcagttcctcgaggacctcgatctcgagttgaaacgggacggcgag
tggcgacggtggtccgggctgaccaacgaggagaaacggaccgtcgccagcgcactcgtc
aagcgagccgtctcgcggggcgttcctgcgaagaagatcgacaatctcgtcggtacggcg
tacgtcctgagcgaggagccggtcgggacggaactccgggatgcaagcgagttctcgacg
ctgttgaacgcgaccgcccgctacgaacgcgccgacgtcggactcggcgtctgtctcggc
aaccgcgagggtgcactcgagcgtgcccggacgcttctgcggaaccaccgccggaacctc
tcggcggggatcgatctcgtcactcgagagggcgtcacccacgaggagcacatccagtgg
ttccacgcgggcgatcgcatccgtgagacgatcgtcggcatcgtcgcggggatggcgatg
ggcaacgacggcgtcagccggtcgaaaccgatcgtcgcgttcgcggagaagtcggacgag
agtgaggacggcggcgaagacgtcgaactcaaggtctcggctcgcggaacgcacgccctc
gttcgaaacggactcgatctttcggtcgtgatgggtgaggcctcgcgagccgtcggcggt
gacggcggcggtcacgacgtcgctgccggcgcgaccgtcccgaaaggccgcgagtccgag
ttcctcgagcacgccgacgaaatcgccggcgaacaactcacctga
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