Natronobacterium gregoryi: Natgr_1604
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Entry
Natgr_1604 CDS
T02383
Name
(GenBank) DNA helicase, Rad3
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
nge
Natronobacterium gregoryi
Pathway
nge03022
Basal transcription factors
nge03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nge00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Natgr_1604
09124 Replication and repair
03420 Nucleotide excision repair
Natgr_1604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nge03021
]
Natgr_1604
03036 Chromosome and associated proteins [BR:
nge03036
]
Natgr_1604
03400 DNA repair and recombination proteins [BR:
nge03400
]
Natgr_1604
Enzymes [BR:
nge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Natgr_1604
Transcription machinery [BR:
nge03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Natgr_1604
Chromosome and associated proteins [BR:
nge03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Natgr_1604
DNA repair and recombination proteins [BR:
nge03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Natgr_1604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
ATPase
AAA_34
ArsA_ATPase
TPR_MLP1_2
HBB
Motif
Other DBs
NCBI-ProteinID:
AFZ72809
UniProt:
L0AH97
LinkDB
All DBs
Position
1589892..1592042
Genome browser
AA seq
716 aa
AA seq
DB search
MRFFPYEQPYENQREAMGRIHNALSRGQDVLFEGACGTGKTLSSLVPALEVAREEDKTVV
ITTDVHQQMRQFVAEARAITREEQIRTVVFKGKGSMCHIDVGYEECQTLRDNTRELVDAE
QEKTQLERRQRELLAESQDGDGSAADARSAVMDELESTEERLEDLEEQNVCDYYRNNLTE
NTDDFFAWLFEDVRTPDEIYEYAERQEFCGYELLKEGIEGVDLVVCNYHHLLDSTIREQF
FRWLGRDPEDVIAVFDEAHNVEDAAREHATRTCSERTFESALDELEESDDPRSEDAANVL
SAFHRALAETYEDSFGFGQRERIGENWSDIAIVNEDRRDDLTLEFLQRYSGQGIDDDLEA
AMQLGQRLDEEYEEAYREGETATRTECQTLQAAGFVSAWMNEGAKEGLYPVVSVTRDAGT
DEIYGRAELYTCLPRQVTGRLFEEVSATVLMSATLQPFEVTENVLGLEDPIALAYGLQFP
EKNRRTYAVETPPLFSSDREDPAVQEEVTDAIYDAVRMTPGNTLAFFPNYGEATRYADRL
ESRTDRAVYVDEPGVAVEERRQEFVGDDDAVLCTSLWGTLAEGVSFDGEDARTVLVVGVP
YPHLDDRSEAVQDAYDVAFDGTETGWRYAVEIPTVRKTRQALGRVIRSPDDVGVRALLDR
RYSSRAKSDLGKYSVNGTFPHEEREELIDIEPTKLKFAMLNFYGDRDAYDDGPPAP
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttttttccgtacgagcagccgtacgagaatcagcgcgaggcgatgggccggatt
cacaacgccctgagccgtggtcaggacgttctcttcgagggggcctgtgggaccggcaag
acgctgtcttcgctcgtccccgctctcgaggtcgcccgcgaggaagacaagacggtcgtc
atcacgacggatgtccaccagcagatgcgacagttcgtcgccgaagcccgcgcgatcaca
cgcgaagagcagattcgtaccgtcgtcttcaaggggaaggggtcgatgtgtcacatcgac
gtcgggtacgaggagtgccagacactgcgggacaacactcgcgaactcgtcgatgccgag
caggagaaaacccaactcgagcgtcgtcagcgcgaactgctcgcggagagtcaggacggc
gacgggtcggcagcagacgctcgttcggccgtgatggacgaactcgagtcgaccgaggag
cgcctcgaggacctcgaagaacagaacgtctgtgactactatcggaacaacctgaccgag
aacacggacgactttttcgcctggctgttcgaggacgttcgcacgccggacgagatctac
gagtacgccgaacgtcaggagttttgcggctacgaactcctgaaagaggggatcgagggt
gtcgatctggtcgtctgtaactaccaccacctgctcgactcgacgattcgagaacagttt
ttccggtggctcggccgtgatcccgaagacgtcatcgccgtcttcgacgaggcacacaac
gtcgaggacgccgcccgcgagcacgcgacccgaacctgctcggaacgaacgttcgagtcc
gcactggacgaactcgaggagagcgacgatccccgtagcgaggacgctgcgaacgtcctc
tcggcgtttcaccgggcgctcgccgagacctacgaggactctttcgggttcgggcagcga
gagcgaatcggcgagaactggtcggacatcgccatcgtcaacgaggacagacgcgacgac
ctcacgctcgagttcctgcagcggtactcgggtcaggggatcgacgacgacctcgaggct
gcgatgcaactcggccagcgactcgacgaggagtacgaagaggcttaccgtgagggtgag
actgcgacgcgaaccgagtgtcagacgcttcaggctgcggggttcgtctctgcctggatg
aacgaaggcgcgaaggaagggttgtatccggtcgtctcggtcacccgcgacgccgggacc
gacgagatctacggccgcgcggaactgtacacctgcctcccgcggcaggttacgggtcgg
ctcttcgaggaggtgtccgccaccgtcttgatgagcgcgacgcttcagccgttcgaggtc
accgagaacgttctcggtctcgaagacccgatcgcactggcctacgggctacagtttccc
gagaagaaccgtcgaacctacgcggtcgagacgccgccgcttttctcctcggaccgggaa
gatcccgccgtccaggaggaagtcaccgacgctatctacgacgccgtccggatgacgcct
ggaaacacgcttgcctttttccccaactacggcgaggcgacccggtacgcggatcgactc
gagtcgcggacggatcgggcggtctacgtggacgaaccgggtgtggccgtcgaggaacgt
cgccaggagttcgtcggggacgacgacgccgtactctgtacctcgctgtggggaacgctc
gctgagggtgtgagtttcgacggcgaggacgcacgcacagtgttggtagtgggggtgccc
tatccgcacctcgacgatcgttccgaagcggtccaggacgcctacgacgtcgcgttcgac
ggcacggagacgggatggcgctacgctgtcgagattccgacggttcgaaagacgagacag
gcactgggtcgcgtgatccggtcgcccgacgatgtcggtgttcgggcgttgctcgaccgt
cggtactcgagtcgggcgaagtcggacctcggcaagtacagtgtcaacggcaccttccct
cacgaagaacgagaggagctgatcgacatcgagccgacgaagctcaagttcgcgatgctc
aacttctacggtgaccgcgacgcttacgacgacgggccgccggcaccgtga
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