Natronobacterium gregoryi: Natgr_1777
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Entry
Natgr_1777 CDS
T02383
Name
(GenBank) PAS domain S-box
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
nge
Natronobacterium gregoryi
Brite
KEGG Orthology (KO) [BR:
nge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nge03000
]
Natgr_1777
Transcription factors [BR:
nge03000
]
Prokaryotic type
Helix-turn-helix
Other families
Natgr_1777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_9
BAT
GAF_2
PAS_4
PAS
HTH_10
GAF
PAS_8
GAF_3
Sigma70_r4
HTH_IclR
HTH_5
Sigma70_ECF
RecC_C
HTH_17
Sigma70_r4_2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AFZ72972
UniProt:
L0AIG8
LinkDB
All DBs
Position
complement(1762598..1767151)
Genome browser
AA seq
1517 aa
AA seq
DB search
MFRGLVSSRGDGSVASPRERRIVEVGSWLVAAIAVVSFALAVTWETALPLDPVGPETLAL
TAGSGPSRSAVLDRLTEEIRSVVETIDETDEAGALERRDVEIDLEVDGDEQLAELSGAVD
DLTALLYERRQRLVATERDRRTIDRLVADGDAPSGDIIEAVLEVARERLALEAGVAARVA
EDGDGVRIRESESESAASAAVPEAQFRWILRERLFESTDESVVFTSVDDGYHSGSPDEEV
EWYVGGRIEVDGELQGGVCFVGHEPRDAITPSERSFLEFVCRRLGRVFEREEYERKRRFK
ERVLEAAPIGITITDPRHPDDPIVYANDAFEEMTGYAESECRGRNCRFLQGRETDSEAVR
ELREAIAAAEPTTVELRNYRKDGSEFWNRVSVAPIEDDQGAVVNFVEFQEDVTERKERAQ
ELRKQKRKLSSLMSNVPGIVYRCRNEPAWPFEFVSEGATELTGYEPEALVEGDVHWAEDV
LVGDNDELWHTIQEAVSGRDPYQVTYQIETADGDRRWLSEQGHGVFDEENLDHLEGVVID
ITPQVESKRELRRTRALLEQSQRVADVGGWELGVTDGQYDAQWSAQTARIHGVDPGADID
YERLVEYYHPDDRPKLERAIERALEDGESYDLELRIDRPDGDRRWVRAIGEPIVAGRHTD
HDDHRVLLRGSVQDITDQKERERELERTRALLEQSQRVADVGGWELDVSEEPSELEWTDE
TARIYGLDADFDPDLEAALGYYSPDDRSHVEQALERAIEEGKSYDLELQLVRDDGERRWV
RAIGEPVVEDGGVVAVRGSIQDVTDQKEREKDLERTQAFLERIQQMASIGGWELDLRTEP
REATWTEELYRIHGMQKDAEPDLAAAIDQYHPDDRDDVWKTLETAIENETVYDLEARMQP
TADDLRWVRGFGAPVFDDGELVKYQGALQEITGLKRRELALESLHEATRRLLGAETVDEV
ADQVVAAAEDVLEAAAIALYGLDSDVNRLVPISHTDAFDQLSSDDPSTDAGNSDSVLWNV
FATGAQTVVDDPEAFDRSDVFENGIESAVVVPIGDHGVFTVASRSGLADAEARRLIETLV
ATAEAAFDRLESEASLRERDAELEARNRHLRRQITVTETIRRINQSLIGAASRDEIERTV
PERLVENDDIAFAWIATAKAEGGPLDPRSYAGSHEDYLDAISLGSATSSEPAARTVRTGE
TTVVENVVDQLQQEPWRKQALDAGFQSAISVPLAVEEYSYGVLTVYATAPDAFTSLERTV
FSELGEAIANAITATETREALHAETAVELTLEVNDSSDVLSRIASVTDARVEYEGLGTHS
GEETLLFFETRGVEPEAVTAVLEGLVSVSQYRLLSVGERDGDDEGDTCRFETLVTGSSVA
SQLVRYGGSPRSIRANGDETVVTVDVPTGADVREFAEMLTEQYGEADLLRRRHVERPMYS
RRELVDALFESLTDRQLEVLRTAYFAGFFEWPRESTGQEVAEMLEVSQPTVNRHLRVGQG
RLFAQLFEEEPTSLESE
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgcggcctcgtttcgtcccgtggagacggttccgtcgcttcgccccgagagaga
cggatcgtggaggtcggttcgtggctcgtagcggcgattgccgtcgtgagcttcgccctc
gctgtcacgtgggagacggcgctgcccctcgatccggtcggtccggagacgctcgcactc
acggccggaagcggaccgagtcgatcggccgtgctcgatcgacttaccgaggagattcgg
agcgtcgtcgaaacgatcgacgaaaccgacgaggccggtgcactggagcgacgcgacgtc
gaaatcgacctcgaggtcgacggagacgagcaactcgccgagctctccggggcggtcgac
gacctgacggcgctcctctacgagcgaaggcagcgactggtcgccaccgaacgagacagg
agaacgatcgaccggctcgtagcagacggcgacgcgccaagcggcgacatcatcgaagcg
gtactcgaggttgcccgtgagcgactggcgctcgaggccggcgtcgccgcacgcgtcgct
gaggacggagacggggttcggatacgcgagtctgagtccgaatccgcggcgtcggcggcc
gtcccggaggcacagttccggtggatactccgagagcgcctgttcgaatcgaccgacgag
tcggtcgtgttcacgagcgtcgacgatggctatcattcgggcagtccggacgaggaggtc
gaatggtacgtcggtggccggatagaagtcgacggcgagttgcagggaggggtctgtttc
gtcggtcacgagccccgtgacgcgatcacgccgagcgagcggagcttcctcgagttcgtc
tgtcgacggctgggtcgcgtgttcgaacgcgaggagtacgagcggaaacgacggttcaaa
gagcgcgtcctcgaggctgcgccgatcggcatcactatcacggacccccgccatccagac
gatccgatcgtctacgcgaacgacgctttcgaggagatgaccggatacgcggagtcggag
tgtcgcggccggaactgtcggttcctgcaagggagggaaacagactccgaagcggttcga
gagctacgagaggcgatcgccgctgcggaaccgacgaccgtcgaactccgcaactaccgg
aaagacgggtcggagttttggaaccgggtgagcgtcgccccgatcgaagacgaccaggga
gcggtggtcaacttcgtcgagttccaggaagacgtcacagaacggaaagaacgagcgcag
gaactccgcaaacagaaacgaaagctgtcgagcctgatgagcaacgttcccgggatcgtc
taccgctgtcggaacgaaccggcgtggccgttcgaattcgtcagcgaaggcgcaaccgaa
ctcaccggctacgaaccagaagcgctggtcgaaggcgacgtacactgggcggaagacgtt
ctcgtcggtgacaacgacgagctctggcacaccatccaggaagcggtgtcgggacgcgac
ccctaccaggtgacctatcagatcgaaactgccgacggtgaccgtcgctggctgagcgaa
cagggccacggcgtcttcgacgaggaaaacctcgaccacctcgagggggtcgtcatcgac
atcacgccacaggtcgaaagcaaacgagaactccggcggacgcgtgcactgctcgagcag
tcccagcgggtcgcagacgtgggcggctgggaactcggcgtcaccgacggccagtacgac
gcccagtggtccgctcagacggcacgcatccacggggtcgacccgggagcagacatcgac
tacgaaaggcttgtcgagtactatcaccccgacgaccgtccgaaactcgagcgagcgatc
gaacgcgctctcgaggacggagagtcgtacgatctcgagcttcgcatagaccggccagac
ggtgacaggcggtgggttcgcgcgatcggtgaaccgatcgtcgctggccgtcacaccgat
cacgacgaccatcgcgtgctgcttcgcggttcagtccaggatatcaccgatcagaaagag
cgcgaacgggaactcgagcggacgcgggcgctactcgagcagtcccagcgggtcgcagac
gtgggtggctgggaactcgacgtcagcgaagagccgtccgaactcgaatggaccgacgag
acggcccgcatatacggtctcgacgccgacttcgatcccgacctcgaggccgcactcggg
tattactctcccgacgaccggtcgcacgtcgagcaagcgctcgaacgggcgatcgaagag
ggcaagtcgtacgacctcgaactgcaactcgtcagggacgacggcgaacggcgctgggtg
cgagcgatcggtgaacccgtcgtcgaagacggcggggtcgtcgcggttcgagggtcgata
caggacgtgaccgaccagaaggaacgcgagaaagacctcgagcggacgcaggctttcctc
gaacgaattcagcagatggcaagcatcggcggctgggaactcgatctccggaccgagcca
cgggaagcgacctggacggaagagttgtaccgaatccacggcatgcagaaggacgcagag
cccgacctcgcggccgcgatagaccagtatcaccccgacgatagagacgacgtctggaag
accctcgagacggcgatcgagaacgagaccgtctacgacctcgaggcgcgaatgcagccg
acggcggacgacctgcgatgggttcgtggtttcggtgcgcccgtcttcgacgacggcgaa
ctcgtcaagtaccagggcgcgctccaggagatcaccggcctgaaacgccgggagttggca
ctcgagtcgctccacgaggcgacccggcgactcctcggcgcagagaccgtcgacgaggtt
gccgaccaggtcgttgctgccgccgaggacgttctcgaggccgctgccatcgcactctac
gggctcgactccgacgtgaaccggctcgttccgatcagtcacaccgatgcgttcgatcag
ctctcgagcgacgacccgtcgacggacgccgggaacagcgactccgtgctctggaacgtg
ttcgccaccggcgcacagacggtcgtcgacgaccccgaagcgttcgaccgctccgacgtc
ttcgagaacggcatcgagagtgccgtcgtcgtcccgatcggtgaccacggggtgttcacg
gtcgcgtccagatcggggctggccgacgccgaggcgcgccgactgatcgagacgctggtc
gcgacggccgaggcggcgttcgaccgcctcgagagcgaggccagtctccgagagcgagac
gccgaactcgaggcgcgcaaccgacatctcagacgacagatcacggtcaccgagacgata
cgacgcatcaaccagtcgctgatcggggcggcgagtcgcgacgagatcgagcggaccgtt
cccgagcgactggtcgagaacgacgacatcgccttcgcctggatcgccactgcgaaagcc
gagggtgggccgctcgatccccgaagctatgccggcagtcacgaagactacctggacgca
atctcgctcgggagtgcaacctcgagcgagccggccgcccggacggtgcggacgggagag
acgaccgtcgtcgagaacgtcgtcgaccaactgcaacaggagccgtggcgcaagcaggcc
ctcgacgccggcttccagtcggctatcagcgtcccgctcgcggtcgaagagtactcctat
ggcgtcctaaccgtctacgcgaccgcgccagacgcgttcacgtcgctcgagcgcaccgtc
ttctccgaactcggcgaggcaatcgcgaacgcgatcaccgcgacggagacacgggaggcg
ttacacgccgagacggccgtcgaactcaccctcgaggtgaacgactcgagcgacgtcctc
tctcggatcgcgtcggtgaccgatgcacgcgtcgagtacgaaggactgggcactcactcg
ggagaggagacgttgctgttcttcgagacccgcggcgtcgaacccgaggcagtgacggca
gtgctcgagggtctcgtctcggtctcacagtaccggttgctcagcgtcggcgaacgtgac
ggcgacgatgagggcgatacctgtcggttcgagacactcgtcaccggcagttccgtcgcc
tcacaactggtccgctacggcgggagtccccgctccatccgcgcgaacggcgacgagacg
gtcgtcaccgtcgacgtcccgaccggggccgacgttcgcgagttcgccgaaatgcttacc
gagcagtacggcgaggctgacctcctgcgacggcgccacgtcgagcgaccgatgtacagc
cggcgcgaactcgtcgacgcactcttcgaatcactcaccgaccgtcaactcgaggtgctc
cggactgcctacttcgcgggctttttcgagtggccccgcgagagcaccggccaagaagtc
gccgagatgctcgaggtgagccagccgacggtcaatcgacatctccgggtcggccagggg
cgactgttcgcacagttgttcgaggaggaaccgacctcactcgagagcgaatga
DBGET
integrated database retrieval system
