Natronobacterium gregoryi: Natgr_2004
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Entry
Natgr_2004 CDS
T02383
Name
(GenBank) peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
nge
Natronobacterium gregoryi
Pathway
nge03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nge00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Natgr_2004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nge03019
]
Natgr_2004
03012 Translation factors [BR:
nge03012
]
Natgr_2004
Messenger RNA biogenesis [BR:
nge03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Natgr_2004
Translation factors [BR:
nge03012
]
Eukaryotic type
Release factors
Natgr_2004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Jiv90
IpaC_SipC
Motif
Other DBs
NCBI-ProteinID:
AFZ73187
UniProt:
L0AJ54
LinkDB
All DBs
Position
1965687..1966946
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AA seq
419 aa
AA seq
DB search
MSQEGEQEQSDRKKYEFRKVIEDLKNYDGSGTQLVSIYVPEDRQISDVVQHVTQEHSEAA
NIKSKQTRTAVQDALTSIKDRLRYYDTYPPENGIVLFSGAVDSGGGRTEMVTNVLESPPQ
PIESFRYHCDSDFLTEPLEEMMADKGLYGLIVLDRRESNVGWLKGKRVEPVKSASSLVPG
KQRKGGQSAQRFARLRLEAIDNFYQEVAGMANDLFVPKRHELDGILVGGPSPTKDEFLDG
DYLHHELQDEVIGKFDVAYTDESGLDDLVDNAEDALADAEVMKDKKQMEEFFEELNAGDL
ATYGFEQTRQNLVMGSVDRLLISEDLRKDVVVFDCGECGNTDYEVIDRRKSTPAHTCSDC
DSAVEATDEDREDAIDHLIGIAEQRGTETKFISTDFEKGDQLYNAFGGFAGILRYSTGV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggagggcgagcaggagcaatcagaccggaagaaatacgagtttcggaaggtc
atcgaagatctcaagaactacgacggctctggaacgcaactcgtatcgatctacgttccc
gaagaccgccagatcagcgacgtcgtccagcacgtcacccaggaacacagcgaagcggca
aacatcaaatccaaacagacccgcaccgcagtccaggacgcgctgacgagtatcaaagac
cggctccggtattacgacacgtatccaccggaaaacgggatcgtgctgttctcgggtgcc
gtcgactccggcggtggtcggaccgagatggtcaccaacgtcctcgagagcccaccccag
ccgatcgagtcgtttcgataccactgcgattcggatttcttgaccgaaccgctcgaggag
atgatggcggacaagggtctctacggcttgatcgtcctcgaccgccgcgaatccaacgtc
ggctggctgaagggcaaacgcgtcgagcccgtcaagtccgcttcctcgctggttccgggc
aaacagcgcaaaggtggccagtccgcccagcggttcgcccgtctgcgactcgaggcaatt
gacaacttctaccaggaagtcgccgggatggcaaacgacttgttcgtccccaagcgccac
gaactcgacgggattctcgtgggcggcccttcgccgaccaaagacgagtttctcgacggt
gactacctccatcacgagcttcaggacgaagtaatcggcaagttcgacgtcgcttacacc
gacgagtccggcctcgacgacctcgtcgacaacgcagaagacgcgcttgccgacgccgag
gtaatgaaagacaaaaagcagatggaggagttcttcgaggaactcaacgcgggcgatctc
gccacctatgggttcgaacagaccagacagaacctggtgatggggtcggtcgatcggctg
ctcatcagcgaggatctccgtaaagatgtcgtcgtcttcgactgcggggagtgtggcaac
accgactacgaggtgatcgaccgtcggaagtcgacgccagcccacacgtgcagcgactgt
gacagcgccgtcgaggcgaccgacgaggaccgtgaggacgcgatcgaccacctcatcgga
atcgctgaacagcgtggcaccgagacgaagttcatctccacggacttcgagaaaggcgac
caactctacaacgccttcggcggctttgctggtattttgcggtattcgaccggcgtctaa
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