Natronobacterium gregoryi: Natgr_3560
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Entry
Natgr_3560 CDS
T02383
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
nge
Natronobacterium gregoryi
Pathway
nge03022
Basal transcription factors
nge03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nge00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Natgr_3560
09124 Replication and repair
03420 Nucleotide excision repair
Natgr_3560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nge03021
]
Natgr_3560
03400 DNA repair and recombination proteins [BR:
nge03400
]
Natgr_3560
Enzymes [BR:
nge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Natgr_3560
Transcription machinery [BR:
nge03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Natgr_3560
DNA repair and recombination proteins [BR:
nge03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Natgr_3560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_33
AAA_30
AAA_22
AAA
TrmB
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AFZ74675
UniProt:
L0ANN5
LinkDB
All DBs
Position
3507954..3509816
Genome browser
AA seq
620 aa
AA seq
DB search
MTRDRSADDSDDLELTIDQFHDACQQVGRPMLTADGIARTLDRSQDAVSDELEALVDRGD
LESFSVTADPIVWYPANLEDLTEQERIVVFPKRREIVVDQPTQFTRAQLSQFAHLADANG
KQGYRYVVRPEDVWQAPHEAFDDLARTMRQALGQRSEPLEEWVRSQWDRAHQFQLTTHED
GYTVLEAKTPEVMGNVARQKLDEEHVHAPISDTEDWVREGAAAAIKRILYEAGYPVQDHR
DLDSGELLDVDLAVSLRDYQQTWVDRFAEAGEGVFVGPPGSGKTVAAMGAMAEVGGETLV
LVPSRDLARQWAETIEEYTNLGPHQIGQYHGGQKHVRPVTIATYQIAGMDRHRSLFDDRE
WGLVIFDECQHVPSDVYRRSTHLQSQHRLGLSASPIREDDRQTEIFTLVGPPIGTDWQAL
FDAGFVAEPELEIRYVPWGDDQQRNAYASADGRERYRIAAKNHGKIDEVRYLLRDHHDAK
ALVFVDYLEQGRELAEALDGPFLSGETPHHERRRLLEEFRRDERDLLVVSRVGDEGIDLP
TADLAIVASGLGGSRRQGTQRAGRTMRPAGGALVYVLATRGTREEEFARRQLQHLGRKGM
TVREQTRGQVGSNETADSDN
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcgcgatcgttccgccgacgacagcgacgatctggaactgacgatcgatcagttc
cacgacgcctgccagcaggtaggccgacccatgctcacggcagacgggatcgctcgcact
ctcgatcgctcccaagacgccgtctcggacgaactcgaggcgctggtcgatcgcggcgac
ctcgagtcgttctcggtcacggccgatcccatcgtctggtatccggcgaacctcgaggat
ctgaccgaacaggaacggatcgtcgtgttcccgaaacggcgcgaaatcgtcgtcgaccag
ccgacgcagttcacacgagcgcaactatcccagtttgctcacctcgcagatgcaaacggc
aaacagggataccgctacgtcgttcgcccggaagacgtctggcaggcaccacacgaggcg
ttcgacgacctcgcccggacgatgcgacaggcactgggacagcgatccgaaccgctcgaa
gagtgggtcaggagtcagtgggatcgagcccaccagtttcagctcaccactcacgaagac
ggctacaccgtcctcgaggccaagacgcccgaggttatggggaacgtcgcccgacagaaa
ctggacgaagaacacgtccacgcaccgatctccgacaccgaagactgggtgcgtgagggg
gcggcggcggcgatcaagcgaatcctctacgaggcgggctaccccgtgcaggatcaccgc
gacctcgattccggagagttgctcgatgtcgacctcgcggtctcgctgcgtgactaccag
cagacgtgggtcgatcgcttcgcggaagccggggaaggcgtcttcgtcggcccgccgggc
agcggcaaaaccgtcgccgccatgggcgcgatggccgaggtcggcggcgagacgctcgtt
ctggtgccgagtcgcgacctcgcacggcagtgggccgagacgatcgaggaatacaccaac
ctcggcccacaccagatcggccagtatcacggcggccagaaacacgtccggccggtgacg
atcgcaacctaccagatcgcgggcatggatcgtcaccgctcgctgttcgacgaccgcgag
tggggactggtgatcttcgacgagtgtcagcacgtccccagcgacgtctaccgccgcagc
acgcacctccagtcccagcatcgcctggggcttagcgcgagtccgatccgggaagacgac
cggcagacagaaatcttcacgctcgtcggcccaccgatcggcaccgactggcaggcactg
ttcgacgcgggcttcgtcgccgaaccagaactcgagatccggtacgttccgtggggcgac
gaccagcagcgaaacgcctacgcgtcggccgacggtcgcgaacggtaccggatcgccgcg
aagaatcacggaaagatcgacgaggtacggtacctgctacgagaccaccacgacgcgaaa
gcgctcgtcttcgtcgactacctcgagcaagggcgcgaactcgccgaggccctcgacgga
cccttcctcagcggcgagacgccccaccacgaacgccggcgactgctcgaggagttccgc
cgcgacgaacgcgacctgctggtcgtctcgcgggtcggcgacgaggggatcgacctcccc
actgcggacctggcgatcgtcgcctccgggctgggtggctcgagacgccagggaactcag
cgagccggccggacgatgcggcccgcgggcggcgcgctggtttacgtgctcgcgacgcgt
gggactcgagaggaagagttcgcgcgacggcagttgcagcatctcggccggaagggaatg
accgtccgcgaacagacgagagggcaagtgggatcgaacgagactgccgatagcgacaac
tga
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