Natronobacterium gregoryi: Natgr_3711
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Entry
Natgr_3711 CDS
T02383
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nge
Natronobacterium gregoryi
Pathway
nge04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nge00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Natgr_3711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nge03019
]
Natgr_3711
03009 Ribosome biogenesis [BR:
nge03009
]
Natgr_3711
04131 Membrane trafficking [BR:
nge04131
]
Natgr_3711
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nge04147
]
Natgr_3711
Messenger RNA biogenesis [BR:
nge03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Natgr_3711
Ribosome biogenesis [BR:
nge03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Natgr_3711
Membrane trafficking [BR:
nge04131
]
SNARE
SNARE associated proteins
Others
Natgr_3711
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Natgr_3711
Exosome [BR:
nge04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Natgr_3711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_5
TIP49
AAA_33
AAA_22
AAA_14
NPHP3_N
RNA_helicase
nSTAND3
AAA_28
AAA_7
Mg_chelatase
DUF815
IstB_IS21
AAA_3
AAA_25
ABC_tran
NB-ARC
TsaE
AAA_11
AAA_24
Zeta_toxin
AAA_17
AAA_18
Sigma54_activat
ATPase
AAA_30
Parvo_NS1
ATPase_2
PhoH
SLFN-g3_helicase
AAA_lid_PRS2_C
Vps4_C
bpMoxR
Bac_DnaA
Zot
HJURP_C
Motif
Other DBs
NCBI-ProteinID:
AFZ74817
UniProt:
L0ANM6
LinkDB
All DBs
Position
complement(3662150..3664411)
Genome browser
AA seq
753 aa
AA seq
DB search
MKLTVKPLKQKDAGRGLAAIDRVSMRELDLENGDYVVISGSGDGQAVARVWPGYPEDEGR
GIVRIDGRLRQEAGVGIDDSVTIEKADVKPAKSVTVALPQNLRIRGDIGPLVRDKLSGQA
VTEGQTVPFSLSFGPMASSGQSVPLKIASTSPDGTVVITDSTNIEMSETPAEQVGAAGDA
SAEGVPNVTYEDIGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTL
MAKAVANEIDAHFETISGPEIMSKYYGESEEQLREVFEEAEENAPAIIFIDELDSIAAKR
EEAGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRLDDIDPALRRGGRFDREIEIGVPD
KEGRKEILQVHTRGMPLEESVDLEHYATNTHGFVGADLESLAREGAMNALRRIRPDLDLE
SQEIDADVLESLQVTEDDFKEALKGIQPSAMREVFVEVPDVTWNDVGGLDDTKERLRETI
QWPLDYPQVFEQMDMEAAKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVG
ESEKGVREIFEKARSNAPTVIFFDEIDSIAGERGRGQTDSGVGERVVSQLLTELDGLEEL
EDVVVVATTNRPDLIDSALLRPGRLDRHVHVPVPDEDARKKIFEVHTRDKPLAEAVDLDW
LAAETEGYVGADIEAVCREASMAASREFITSVDPEEIGDTVDNVRISKEHFENALEEVGP
SVTAETRERYEEIEEEFQRVEPAEEEQLGRTFQ
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttaccgtcaaaccactcaaacagaaagacgccgggcgcggactagccgcgatc
gatcgcgtctcgatgcgcgaactcgacctcgagaacggcgactacgtcgtaataagcggt
agcggtgacggtcaggccgtcgcccgcgtctggccaggctatcccgaagacgagggccgg
gggatcgtccggatcgacggccgcctgcgccaggaggccggcgtcgggattgacgacagc
gtcacgatcgagaaagcagacgtcaaacccgccaaatccgtcacagttgcgcttccgcaa
aacctccgcattcgtggcgatatcggcccgctcgtccgcgacaagctctccggacaggcc
gtcaccgagggccagactgtcccgttctcgctttcgttcggcccgatggccagctccggg
cagtcggtgccgctgaagatcgcgagtacctcgccggatggtaccgtcgtcatcaccgac
tcgacgaacatcgagatgtccgagacgccggccgaacaggtcggtgctgccggcgacgcc
tccgcggagggcgtccccaacgtcacctacgaggacatcggcggtctagacgacgaactc
gaccaagtccgggagatgatcgaactcccgatgcgtcaccccgaactcttccagcaactc
ggcatcgagccgcccaagggtgtcttgctacacggcccacccggcaccgggaagacactg
atggcgaaagccgtcgccaacgagatcgacgcccacttcgagacgatctccggcccggag
atcatgtctaagtactacggcgaaagcgaggagcaactccgcgaagtcttcgaagaggcc
gaagagaacgctcctgcgatcatcttcatcgacgaactcgactccatcgccgccaaacgc
gaggaagccggcggcgacgtcgaacgacgcgtcgtcgcacaactgctcagcctgatggac
ggcctcgaggaacgcggccgcgtcaccgtcatcgccgcgaccaaccgtctcgacgacatc
gaccccgcactccggcgtggcggccggttcgaccgcgagatcgaaatcggtgtcccggac
aaggaaggccgtaaggagatcctgcaggtccacactcgcgggatgcccctcgaagagtcc
gtcgatctcgagcactacgctaccaacacgcacgggttcgtcggggccgacctcgagagc
ctcgcccgcgaaggcgcgatgaacgccctgcgtcgaatccgccccgacctcgacctcgag
tcccaggagatcgacgccgacgtcctcgagtcgctgcaggtcaccgaagacgactttaag
gaggcactcaagggcatccagccctctgcgatgcgggaggtcttcgtcgaagtgcccgac
gtcacctggaacgatgtcggcgggctcgacgacaccaaagaacggctgcgcgagacgatc
cagtggccgctggactacccccaggtcttcgagcagatggacatggaggccgcgaagggc
gtcctcatgtacggtcccccggggaccggaaagacgttgctcgccaaagcagtggcaaac
gaggcccagtcgaacttcatctcgatcaaaggcccggaactgctgaacaagtacgtcggc
gagtccgagaaaggcgtccgcgaaatcttcgagaaggcacggtcgaacgcgccgaccgtg
atcttcttcgacgaaatcgattcgatcgcgggcgaacgcggccgcggccagaccgactcc
ggcgtcggcgaacgcgtcgtctcccagctactgacagaactggacggcctcgaggaactg
gaagacgtcgtcgtcgtcgcgacgacgaaccgtcccgacctgatcgactctgcactgtta
cgtcccggccgactggaccgtcacgtccacgtcccggttccggacgaggacgcccgcaag
aagatcttcgaggtccacacccgcgacaagccactcgccgaggcagtcgacctcgactgg
ctcgctgccgagacagaaggctacgtcggagccgacatcgaagccgtctgccgcgaggct
tcgatggccgctagccgcgagttcatcacctccgtcgaccccgaagagatcggtgacacg
gtcgacaacgtccgcatcagcaaggaacacttcgagaacgcgctcgaggaagtcggtccg
agcgtgactgccgaaacgcgcgaacgctacgaggagatcgaagaggagttccagcgagtc
gaacctgccgaggaggaacagctcgggcggacgttccagtaa
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