Natronobacterium gregoryi: Natgr_3747
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Entry
Natgr_3747 CDS
T02383
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nge
Natronobacterium gregoryi
Pathway
nge04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nge00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Natgr_3747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nge03019
]
Natgr_3747
03009 Ribosome biogenesis [BR:
nge03009
]
Natgr_3747
04131 Membrane trafficking [BR:
nge04131
]
Natgr_3747
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nge04147
]
Natgr_3747
Messenger RNA biogenesis [BR:
nge03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Natgr_3747
Ribosome biogenesis [BR:
nge03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Natgr_3747
Membrane trafficking [BR:
nge04131
]
SNARE
SNARE associated proteins
Others
Natgr_3747
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Natgr_3747
Exosome [BR:
nge04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Natgr_3747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
CDC48_2
RuvB_N
AAA_5
AAA_22
TIP49
AAA_2
AAA_33
AAA_14
nSTAND3
NPHP3_N
RNA_helicase
AAA_lid_PRS2_C
IstB_IS21
AAA_28
Mg_chelatase
AAA_7
AAA_17
AAA_18
ABC_tran
AAA_3
ATPase
DUF815
Sigma54_activat
NB-ARC
Parvo_NS1
AAA_24
AAA_30
TsaE
PhoH
Vps4_C
AAA_11
SLFN-g3_helicase
NACHT
IPT
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
AFZ74850
UniProt:
L0AP26
LinkDB
All DBs
Position
complement(3700716..3702947)
Genome browser
AA seq
743 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGADTTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVTIRKAEATKAEELVLAPPEEASVQFGSDAAGMVKRQIL
KRPVVGRDIVPVMSSTNHPFMRSPGQAIPLIAVETEPEGVVLITEDTDVELREEPISGFE
KTGGGITYEDIGGLQSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDET
GREEILQIHTRGMPLSDDVNLGHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEE
DIPPSLIDRMIVKREDFRGALNEVEPSAMREVLVELPKISWDDVGGLHEAKDQVKESVEW
PLSNPERFDRLGIDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVSPTVIFFDELDALAPGRGGGETGSNVSERVVNQLLTELDGLEEMED
VMVIGATNRPDMIDPALLRSGRFDRLVMIGEPDIDGRERILEIHTENTPLAADVTLKEIA
EITDGYVGSDLESIAREAAIEALREDKEANVVEMSHFRQAMENVRPTITDEILDYYERIE
EEFQGGSGGPDPTGRRSSRIGFQ
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagttcaattggaggttgcgaaggcatacccgaacgactcgggtcgtggtatt
gcccgactcgacccggacacgctgctacatctcaagctgagtccgggcgacattatcgaa
atcgaaggtgcggatacgaccgccgccaaggtgtggcgggcagaccggcaggactggaac
acggataccgttcgaatcgacggtttcacccgtcagaacgccgatgtcggcatcggcgag
cgcgtcacgatccggaaagccgaggcgacgaaagccgaagagctcgtgctcgcgccgccg
gaggaggcatcggtccagtttggctccgacgccgccggcatggtgaaacgacagatcctc
aaacggccggtcgtcggccgggacatcgtcccggttatgtcctcgacgaaccacccgttc
atgcgctctcccggccaggcgatcccgctgatcgccgtcgaaactgaacccgagggcgtc
gtcctcatcaccgaggataccgacgtcgaactccgtgaggagccgatctccggcttcgag
aagaccggtggtgggatcacctacgaggacatcggcgggctccagagcgagatccagcgg
gtccgcgagatggtcgagttgccgatgaaacacccccagatcttcaagaaactggggatc
gagccgccacagggagtcttgctccatggaccgccgggtactgggaagaccctgctggcg
aaggccgtcgccaacgagacctcggcgagtttcttctctatcgccggcccggagatcatc
tcgaagtactacggcgagtccgaacaacaacttcgggagatcttcgaggacgcaagcgag
gagtcgcccgcgatcatcttcatcgacgaactcgactccatcgcaccgaagcgagaggac
gtcaccggcgaggtcgaacgtcgggtcgtcgcccagttgttgacgatgatggacggcctc
gaggcccgcggccaggtgatcgtcatcgccgcgacgaaccgcgtcgatagcgtcgacccc
gccctgcgccgaccgggccggttcgaccgcgagatcgagatcggcgtccccgacgagacg
ggccgcgaggagatcctccagatccacacccgcggcatgcccctctccgacgacgtcaac
ctcggccatctcgccgacgagacccacggcttcgtcggggctgacatcgagtccctgacg
aaagaagccgcgatgaaggcactgcgccggtacctccccgagatcgatctcgacgaggag
gacatcccgccgagtctcatcgaccggatgatcgtcaagcgcgaagacttccgtggcgcg
ttaaacgaggtcgaaccctccgcgatgcgggaggtgctcgtcgaactccccaagatctcg
tgggacgatgtcggcggcctccacgaggccaaagaccaggtcaaagagtccgtcgagtgg
ccgctctcgaaccccgaacggttcgaccggctcggcatcgacccgccggccggcgtcttg
ctctacggcccgccgggcaccggcaagactctgatggcgaaagccgtcgccaacgagacc
aatgcgaacttcatctcggtccgtggcccgcaactgctctcgaagtgggtcggcgagtcc
gagaaagcgatccgccagaccttccggaaggcccgtcaggtctcgccgacggtgatcttc
ttcgacgagctcgacgcgctcgcacccggccgcggtggcggtgaaaccggctcgaacgtc
tccgagcgggtcgtcaaccagttgctgaccgagctcgacggcttggaagagatggaagac
gtgatggtgatcggtgcgaccaaccgtccggacatgatcgaccccgcactcctgcggtcg
ggtcggttcgaccggctggtcatgatcggcgaacccgatatcgacggccgcgaacgaatc
ctcgagatccacaccgagaacacaccactggccgccgacgtcactctcaaggaaatcgcc
gagatcaccgacggctacgtcggcagcgacctcgagtcgatcgcccgcgaggcggccatc
gaggcgctgcgtgaggacaaagaggcaaatgtggtcgagatgagtcacttccgacaggcg
atggagaacgtccgaccgacgatcaccgacgagattctcgactactacgagcgcatcgaa
gaggagttccagggcggctcgggcggtccggacccgaccggtcgccgcagcagccgtatc
ggattccagtaa
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