Novosphingobium ginsenosidimutans: FRF71_00160
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Entry
FRF71_00160 CDS
T06189
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ngf
Novosphingobium ginsenosidimutans
Pathway
ngf03420
Nucleotide excision repair
ngf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ngf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FRF71_00160
03430 Mismatch repair
FRF71_00160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngf03400
]
FRF71_00160
Enzymes [BR:
ngf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FRF71_00160
DNA repair and recombination proteins [BR:
ngf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FRF71_00160
MMR (mismatch excision repair)
Other MMR factors
FRF71_00160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
EcoEI_R_C
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QEA17400
UniProt:
A0A5B8S9E8
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All DBs
Position
34161..36443
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AA seq
760 aa
AA seq
DB search
MLSDSSSDPLLDGLNVPQREAVLATEGPVLMLAGAGTGKTAALTARLAHIIRSRLAWPSE
ILCVTFTNKAAREMKERVGHLVGPAVEGMPWLGTFHAIAAKMLRRHAELAGLQSNYTIID
TDDQLRVLKQLIQAEGLDEKRWPPRQLAQCIDRWKNKGLRPEDLDALENESFANGQGQKF
YRLYQDRLKTLNACDFGDLLLHVVTILRSYPEVLEQYRARFKYIMVDEYQDTNQIQYLWL
RLLAQPRHNICVVGDDDQSIYSWRGAEVANILKFEKDFPGAKIIKLEQNYRSTPDILAAA
SGLIDANSQRLGKTLWTERNGGDKVRVIGVWDAPEEARRVGEEIERLEREGASLNQAAIL
VRAQFQTREFEDRFIAIGMGYKIIGGFRFYERAEIRDALAYLRLISQPSDDLAFERIYNT
PKRGLGDKTLEKLHRHARVRGVPLSLAAVEIADTDELPARARNTLVDFMRGVARWRDLAK
IAAPAELVRTLLDESGYTAALQAEKTAESAGRLENLTELARAMEEYETLGDFLEHVSLVM
DNEAADDAEKVTIMTMHGAKGLEFDNVFLPGWEEGVFPSQRALDEGGLASLEEERRLAYV
AITRARRRCTILHAANRRIYGQWTSSIPSRFIADLPDAHIEQESTLSGGASLWRAQWSER
DDPFAHVARDNSARAATRGPGWQRAAASAYDPTPRRLPEATRSAASFAAKPRGDIALGAR
VFHDKFGYGTVIQQEGNKLEIDFEAAGPKRVIDSFVKLAD
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgctctccgactccagctccgatcccctgctcgacggtctcaacgtgccgcagcgcgag
gccgtgctagccaccgaaggcccggtgctgatgctggcgggcgccggtactggcaagact
gcggcgctcaccgcacggctggcgcacatcatccgcagccggctcgcctggccgagcgag
atcctctgcgtcaccttcaccaacaaggccgcgcgcgagatgaaggagcgggtcggccat
ctggttggcccggcggtcgaagggatgccctggctcggcaccttccacgccatcgccgcc
aagatgctgcgccgccatgccgaactggcgggcctgcaatcgaactacacgatcatcgat
accgacgatcagctgcgcgtgctcaagcagctcattcaggccgaggggctagacgaaaag
cgctggccgccccgccagcttgcccaatgcatcgatcggtggaaaaacaagggactgcgg
cccgaagatctggatgcacttgagaatgaaagctttgccaacgggcaaggccagaagttc
taccggctctaccaggaccggctgaagacgctcaacgcctgcgatttcggcgatctgctg
ctgcacgtcgtcacgatcctgcgcagctacccggaagtgctggagcagtaccgcgcgcgc
ttcaagtacatcatggtcgacgagtatcaggataccaaccagatccagtacctgtggctc
cgcttgctggcccagccgcgccacaacatctgtgtggtgggcgatgatgaccagtcgatc
tattcatggcgcggcgcagaagttgccaatatcctgaagttcgagaaggattttccgggc
gcgaagatcatcaagctggagcagaattatcgctctaccccggatatccttgccgccgcc
tcgggcctgatcgatgccaacagccagcggctcggcaagacgctgtggaccgagcgcaac
ggcggcgacaaggtccgcgtgatcggggtctgggatgcgcccgaagaagcccgccgggtc
ggcgaggagatcgagcggctggaacgcgaaggggccagcctcaaccaggcggccattctg
gtccgcgcccagttccagacccgcgagtttgaggaccgcttcatcgcgatcggcatgggc
tacaagatcatcggcggcttccggttctacgaacgcgccgagattcgcgatgccctggcc
tacctgcggctgatctcgcagccgagcgacgacctggcgttcgagcggatctacaatacc
cccaaacgcggcctgggtgacaagacgctggaaaagctccaccgccatgcccgggtgcgc
ggcgtgccgctgagcctcgccgcggtcgaaattgccgataccgacgagctgccggcccgc
gcgcgcaacacgctggtcgatttcatgcgcggtgtcgcccgctggcgcgatctcgctaag
atcgccgccccggcggaactggtccgcacactgctcgacgaaagcggctacaccgccgcg
ctccaggccgaaaagaccgctgaaagcgcgggacggctggaaaacctcaccgaacttgcc
cgcgcgatggaggaatacgagacgctcggcgatttcctcgaacacgtcagcctggtgatg
gacaatgaggccgccgacgatgccgaaaaggtcacgatcatgaccatgcacggcgccaag
gggctggagttcgataatgtgttcctgcccggctgggaggaaggcgtcttcccaagccag
cgcgcgcttgacgagggcgggcttgccagcctggaggaggaacgccgcctggcctatgtc
gcgattacccgcgcgcggcggcgctgcacgatcctccatgccgccaaccgccggatctat
ggccaatggaccagttcgattcccagccgcttcattgccgatctgcccgatgcccatatc
gaacaggaatcgaccctgtcgggcggtgcgtcgctatggcgggcgcagtggagcgagcgc
gacgatccctttgcccatgtcgcccgtgacaattccgcccgcgctgccacccgcggccct
ggctggcagcgcgccgcggcgtccgcctatgaccccacaccgcgtcgcctgcccgaagcg
acccgctctgctgccagctttgccgccaaaccgcgcggcgacatcgcgcttggcgcgcgg
gtgtttcacgacaagttcggttacggcacggtgatccagcaggaaggcaacaagctggaa
atcgacttcgaagccgccggtcccaagcgcgtgatcgacagcttcgtgaagctcgccgac
taa
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