Novosphingobium ginsenosidimutans: FRF71_00405
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Entry
FRF71_00405 CDS
T06189
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ngf
Novosphingobium ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:
ngf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ngf01011
]
FRF71_00405
Enzymes [BR:
ngf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
FRF71_00405
Peptidoglycan biosynthesis and degradation proteins [BR:
ngf01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
FRF71_00405
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
QEA17402
UniProt:
A0A5B8S9N4
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Position
86890..88650
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AA seq
586 aa
AA seq
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MLALGLASSLAGLAAPVHANSAAVDYFRNRADRSNVPTLLSQDDRSYYRDLFGAIERSDW
AKVQAMFAQRQDGPLHQVALAEYYLAPTSPKIELDALNAWLAKGTDLPQAEQIALLAQKR
GATALPSLPQAGSLVSQPNRAKRIRPRETNDGTMPAAVAAAINSSIKADNPAGAKALLDG
IDTQLSLGARAEWRAKIAWSFYIENDDTSAYALAQTVQDGAGPWVAEGWWTAGLAAWRIG
DCMGAGDAFARTAGASQNSELTAAALYWQSRAAVRCRQPEKASASLKAAAKMDETLYGML
AAEQLGLALPQTHTAPDFTQSDWQKLRDENNIRTAVGLAEIGRDGLADEVLRHQARLGPA
NEYQPLSRLARDLGLPSTQLWMAYNAPVGGRAEPAARFPTPKWTPANNWQVDPALVYAHA
LQESVFRAAAVSPAGARGLMQIMPAAARDHAGALGVSGNPGDLNKPEINLAFGQRHLQML
RDAPGTQGLLPKVMAAYNAGLTPIARWQYEIKDQGDPLLWIESVPYWETRGYVNIVMRNY
WMYERQAGGPSESRIALAQGLWPTFPGISGASAVRMTANGVIQRGR
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgctggccctgggcctggcgagcagccttgccgggctggccgcgccggtgcacgccaac
agcgcggcggtcgattacttccgcaaccgggccgatcgcagcaatgtccccacgctgctc
agccaggatgacaggtcctattaccgcgacctgtttggcgcgatcgagcggagcgactgg
gccaaggtccaggcgatgtttgcccagcgccaggacgggccgctgcatcaggtcgcgctg
gccgaatactacctcgcccccacctcccccaagatcgagcttgatgcgctcaatgcctgg
ctggccaagggcaccgacttgccgcaggccgagcagatcgcgctgctggcacaaaagcgg
ggagcgaccgcgctgccgagtctgccccaggccggatcgctggtcagccagccgaaccgc
gccaagcggatccgaccgcgcgaaaccaatgacggaaccatgccggccgccgtggccgcc
gcgatcaattccagcatcaaggctgacaatcccgccggggccaaggccttgctcgacgga
atcgatacgcagctctcgctcggagcgcgggctgaatggcgcgccaagatcgcgtggtca
ttctatatcgagaatgacgatacctccgcctatgcccttgcccagacggtgcaggacgga
gccggaccgtgggtcgccgaaggctggtggactgcgggccttgcggcttggcggatcggt
gattgcatgggcgcgggcgatgccttcgcccgcactgctggtgcctcgcagaacagcgaa
ctgaccgcggctgcgctctactggcaaagccgtgctgccgtgcgctgccgccagcccgaa
aaggcctcggcctcgctcaaggctgcggcaaagatggatgagacgctttacggcatgctc
gctgcggagcagcttgggctcgccctaccgcaaacccacaccgcgccggactttacccag
agcgactggcagaagctgcgcgatgaaaacaacatccgcacagccgtcggcctggccgag
atcggccgcgatggcctggccgatgaagtcctccgtcaccaggcccggcttggtcctgcc
aatgaataccagccgctcagccgtcttgcccgcgatctgggcttgccctcgacgcagctc
tggatggcctataatgccccagtcggcggccgcgccgaaccggcggcccgcttcccgaca
ccgaaatggaccccggccaacaactggcaagtcgatcctgcgctggtctatgcccacgcc
ctgcaggaatcggtgtttcgtgctgcggctgtgagcccggccggcgcgcggggcctgatg
cagatcatgccagccgctgcgcgcgatcacgccggcgcgttgggtgtttccggcaatccg
ggcgacctcaacaagccagagattaacctcgccttcgggcagcgccacttgcagatgctc
cgcgatgcgcctggcacgcagggcctgctgcccaaggtcatggctgcctataacgccggc
ctcaccccgattgcccgctggcagtatgagatcaaggaccagggcgatcccttgctgtgg
attgaaagcgttccctattgggagacgcgcggctatgtgaacatcgtgatgcgcaattac
tggatgtacgagcgccaggcgggcggaccttcggaaagcaggattgcgctggcccagggt
ctgtggccgaccttccccggcatctccggcgccagcgccgtgcggatgaccgccaatggg
gtgatccagcgtggccgttga
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