Novosphingobium ginsenosidimutans: FRF71_01025
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Entry
FRF71_01025 CDS
T06189
Name
(GenBank) DNA recombination protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
ngf
Novosphingobium ginsenosidimutans
Pathway
ngf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ngf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FRF71_01025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngf03400
]
FRF71_01025
DNA repair and recombination proteins [BR:
ngf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FRF71_01025
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FRF71_01025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Gly-rich_Ago1
YfiO
Motif
Other DBs
NCBI-ProteinID:
QEA14823
UniProt:
A0A5B8S0A9
LinkDB
All DBs
Position
complement(219350..219949)
Genome browser
AA seq
199 aa
AA seq
DB search
MDLRTPAIVCAARPHGETGVILRLLSEDHGLVASYVAGGRGRNLRPVLLPGNLVEAELRV
RPGSQLPSARVELVASRGPWLTEPLPAAAITWATTLTASALPERQPFPALHQALTALLDA
VCHAPSARGWLPGMTAFEALLLRELGYGAVERSADPDWNAQLAAFDKLGPLVARYPLADR
RSDVMAARAMLRERLGRIE
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggacctgcgcacccccgcaatagtttgcgccgcccgcccgcacggcgagacgggtgtg
atcctgcgcctgctgagcgaggatcatggcctcgtcgcgagctatgtcgcgggcgggcgt
gggcggaatctgcgcccggtgctgctgcccggcaatctggtcgaggccgaactgcgggtg
cggcccggcagccagctcccctcggcgcgggttgagctggtcgccagccgcggcccctgg
ctgaccgagccgctacctgctgccgcgatcacctgggcgaccacgctgaccgcctcggcg
ctgcccgaacggcagccctttcccgcgctgcaccaggcgctcaccgcgctactcgatgcg
gtctgccatgccccctcggcgcgcggctggctgcccggcatgaccgctttcgaggcgctg
ctgctgcgcgaactgggctatggcgcggttgagcgctcggccgatccggactggaatgcc
cagctggcggcctttgacaagcttggcccgctggtggcgcgctatccgcttgccgatcgg
agaagcgatgttatggcggcgcgcgccatgctgcgggagcggcttggccggattgagtag
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