Novosphingobium ginsenosidimutans: FRF71_03125
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Entry
FRF71_03125 CDS
T06189
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
ngf
Novosphingobium ginsenosidimutans
Pathway
ngf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ngf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FRF71_03125
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ngf01007
]
FRF71_03125
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ngf03016
]
FRF71_03125
Enzymes [BR:
ngf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
FRF71_03125
Amino acid related enzymes [BR:
ngf01007
]
Aminoacyl-tRNA synthetase
Class II (U)
FRF71_03125
Transfer RNA biogenesis [BR:
ngf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FRF71_03125
Prokaryotic type
FRF71_03125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
FDX-ACB
B5
DUF302
Motif
Other DBs
NCBI-ProteinID:
QEA15214
UniProt:
A0A5B8S252
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All DBs
Position
628006..630399
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AA seq
797 aa
AA seq
DB search
MKFSLSWLKDHLDTSASVEEIAAKLNAVGLEVEGIEDPAAKLAGFKVAKVLTAERHPNAD
KLQVLTVDTGHGTPLQVVCGAPNARAGLVGVLGLPGAVVPAGGFELKKSAIRGVESNGMM
CSTRELELGDDHDGIIELPADAPVGTDFADYHGTDPVFDVAITPNRPDCMGVYGIARDLA
AAGLGTLKPIAVQAVPGSFPCPLPIRTDDPEGCPAFFGRAIRGVKNGASPQWMQDRLLSA
GQRPISALVDITNYVMLAYGRPAHAYDLSKLTGAIFARRAQDGEQVLALNGKEYTLTAAM
TVIADDIGVHDIAGIMGGEHSGCSDETTDVLLEVAYFDPVRIGETGRALNLTSDARARFE
RGLDPAFLDAGLAILTELIVEICGGEPSEVIQAGNPPAGTKVVAYDPAMSEGLGGVAIPG
ERQREILAALGFHADAQWNVTVPSWRPDVDGAADLVEEVVRIHGLDNVASVALPRVDGVA
RPTATLAQKLERKLRRAAAARGLNEAVTWSFLPEDQAEAFADGNGGLWTLANPISEDLKV
MRPSLLPGLLSAAKRNGDRGAAGLRLFELGRRYLRGEGGHSDERLTLGVVLAGEKAARGW
ATGKAVPFDAFDAKAEALALLAEAGAPVDNLQVMGEAGAQFHPGQSATLRLGPKTVLARF
GMLHPALLKQFDVDGPVAAVELFLDAIPAKRGAAGFARAAYAPPALQAVTRDFAFLVDAK
LAAGDLVRTVKGADKANIVAVRLFDDFRGQGVPEGQKSLAVEVTLQPAEKSYTEAELKAI
AEAITTAAAKLGAVLRG
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgaagttctcgctttcctggctcaaggaccacctcgacacctcggcttcggtcgaggag
atcgcggccaagctcaatgccgtcgggcttgaggtggaggggatcgaggatcccgccgcc
aagctcgccggattcaaggtcgccaaggtgctgaccgccgagcgccaccccaatgccgac
aagctgcaggtcctcaccgtcgataccggtcacggcacgccgctgcaggttgtctgcggt
gcgcccaatgcccgcgctggcctggtcggcgtgctcggcctgccgggtgcggtagtcccg
gccggcgggttcgaactcaagaagagcgcaatccgcggcgtcgagagcaacggcatgatg
tgctcgacccgcgagctggagctgggcgacgatcacgacgggattatcgagctgccggcc
gatgcgccggttggcaccgactttgccgactatcatggcaccgatccggtcttcgacgtg
gcaatcacgcccaatcggccggactgcatgggcgtctacggcattgcccgcgatctggcg
gcggccggtctcggcacgctgaagccgatcgcggttcaggcagtacccggcagcttcccc
tgcccgctgccgatccgcaccgacgatccggaaggctgcccggccttcttcggccgcgcg
atccgcggcgtgaagaacggcgcctcgccgcagtggatgcaggaccgcctgctcagcgct
ggtcagcggccgatctcggcgctggttgacatcaccaattacgtcatgctggcctatggc
cgcccggcccacgcttatgacctttccaagctgaccggtgcgatcttcgcccgtcgcgcc
caggatggcgaacaggtgctggcgcttaacggcaaggagtacacgcttactgcggcaatg
accgtcattgccgatgacattggcgtccacgacatcgccgggatcatgggcggggagcat
tcgggctgttcggatgagacgaccgacgtgctgctggaagtggcctatttcgatccggtg
cggatcggcgaaaccggccgtgcgctcaacctgacctcggatgcccgtgcccggtttgag
cgcggtctcgatccagccttcctcgatgccggtcttgcaatcctgaccgaactgatcgtg
gagatctgcggcggggagccgagcgaagtgatccaggccggtaatccgcccgccgggacc
aaggttgtggcctatgatccggccatgtcggaaggcctcggcggcgttgccattcccggc
gagcgccagcgcgagatcctcgctgcgcttggtttccatgccgatgcgcaatggaacgtg
accgtgccgagctggcgcccggacgtcgatggcgccgccgatctggtcgaagaagtggtc
cgcatccatgggctcgacaatgtcgccagcgtcgcgctgccccgcgttgatggcgtcgct
cggccgaccgcgaccctggcgcagaagctggagcgcaagctgcgccgcgctgccgccgcg
cgcgggctcaacgaagcggtcacctggtcgttcctgcccgaagaccaggcggaggccttt
gcggacggcaacggcggcctctggacgctggccaatccgatcagcgaagacctgaaggtc
atgcgcccctcgctgctgccgggcctgctctccgccgccaagcgcaacggcgatcgcggt
gctgccggcctgcgactgttcgaattgggccgccgctacctgcgcggcgaaggtggccac
agtgacgaacggctgactcttggcgtcgttctggcaggcgagaaggccgcgcgcggctgg
gcaaccggcaaggccgtgcccttcgacgccttcgatgccaaggccgaagcgctggcattg
ctggccgaagccggtgcgccggtcgacaacctgcaagtcatgggcgaggccggtgcgcag
ttccatcccggccagtcggccaccttgcggcttggccccaagacagtccttgcccgcttc
ggcatgctgcatccggcgctgctcaagcagttcgatgtcgacgggccggtcgctgcggta
gagctgttccttgacgccatcccggccaagcgcggcgccgccggctttgcccgcgccgcc
tatgcgcccccggcactgcaggccgtaacgcgcgactttgccttcctggtcgatgccaag
cttgcggcaggtgacctcgttcgcacagtcaaaggcgcggacaaggcgaacatcgtagcc
gtccgcctgttcgatgacttccgcggccagggcgtgcccgagggacagaagtcgctggcc
gtcgaggtcacgctgcaacccgccgaaaaaagctataccgaggctgagctgaaggcgatt
gccgaggcgatcaccacggctgcggcgaaactcggggcggtgctgagaggttaa
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