Novosphingobium ginsenosidimutans: FRF71_03310
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Entry
FRF71_03310 CDS
T06189
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ngf
Novosphingobium ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:
ngf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ngf03009
]
FRF71_03310 (rimO)
Enzymes [BR:
ngf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FRF71_03310 (rimO)
Ribosome biogenesis [BR:
ngf03009
]
Prokaryotic type
ribosomal protein modification factors
FRF71_03310 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QEA15247
UniProt:
A0A5B8S3C2
LinkDB
All DBs
Position
662821..664203
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AA seq
460 aa
AA seq
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MTIELPDQKRVGMVSLGCPKALVDSERILTRLRADGYAMSPDYAGADVVLVNTCGFLDSA
KEESLAAIGEAIAENGRVIVTGCMGEEAETIRARFPQVLAVTGAHQYEAVVEAVHEAAPP
SQGPFVDLIPQPDVKLTPRHYSYLKISEGCNHACAFCIIPQLRGKLASRRVDAVLREAEK
LVAAGTKELLVISQDTSAYGVDIRHESRMWKDREVRAHMTDLARELGQLRTPANVPGGGQ
APWVRLHYVYPYPHVDAVIPLMAEGLLTPYLDIPFQHASPSVLKAMKRPANEAKVLERLK
SWREICPDIAVRSSFVVGFPGETEADFQYLLDWLDEAQLDRVGAFRFEPVAGAAANDLPG
TVPEAVKEERYARIMAKTAAISAAKLQAKIGRTLPVIIDMVGEPDEDGDIGATGRSQADA
PEIDGAVHLREVPASLQPGDIVQVTIEDADEHDLFGAIAG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcgaacttcccgaccagaagcgcgtgggtatggtcagccttggctgcccgaag
gcgctggtcgattccgaacggatccttacccggctgcgcgccgatggctatgcaatgagc
cccgactatgccggggccgacgtcgtgctggtcaacacctgcggtttcctcgattccgcc
aaggaggagagcctggccgcgattggcgaggcgattgccgaaaacggccgtgtcatcgtc
accggctgcatgggcgaagaggccgaaacaatccgcgcccgcttcccacaggttctcgcc
gtaactggcgcgcaccagtacgaggcggtggtcgaggcggtgcacgaagcggcaccgcct
tcgcagggtccgttcgttgacctgatcccccagccggacgtcaagctgaccccgcggcac
tatagctacctcaagatttcagagggctgcaatcacgcctgcgccttctgcatcattccc
cagctgcgcgggaagctggccagccgccgggtcgatgccgtgctgcgcgaggcggagaaa
ctggttgccgccgggaccaaggaactgctggtgatcagccaggacacctcggcctatggc
gtcgatatccggcacgagagccgcatgtggaaggaccgcgaggttcgcgcccatatgacc
gacctggcccgcgaactgggccagctccgcacgcccgccaatgtacctgggggaggccag
gcaccgtgggtgcggctgcactatgtctatccctatccgcacgtcgatgccgtaatcccg
ctgatggccgaagggctgttgacgccgtacctcgacattccgttccagcacgccagcccc
agcgtgttgaaggcgatgaagcgcccggcgaacgaagccaaggtgctcgaacgcctcaag
tcctggcgcgagatctgccccgacatcgcagtccgttcgtccttcgtggtcggcttcccg
ggcgagaccgaggcggacttccagtacctcctagactggctcgacgaggcccagctcgac
cgggtcggggccttccgctttgaacccgtcgccggcgcggccgccaatgacctgcccggc
accgtgccggaagcggtcaaggaagaacgctatgcccggatcatggcaaagactgccgcg
atcagcgctgccaagctccaggccaagatcggccggactctgccggtgatcatcgacatg
gtgggtgagcctgacgaagacggtgatatcggcgcaaccggccggtcacaggccgatgcg
cccgagatcgacggcgcggtccacctgcgtgaagtgccggccagcctgcagcccggcgac
attgtccaggtcaccatcgaggacgccgacgagcacgacctgttcggcgcgattgcgggc
tag
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