Novosphingobium ginsenosidimutans: FRF71_03800
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Entry
FRF71_03800 CDS
T06189
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
ngf
Novosphingobium ginsenosidimutans
Pathway
ngf00300
Lysine biosynthesis
ngf01100
Metabolic pathways
ngf01120
Microbial metabolism in diverse environments
ngf01230
Biosynthesis of amino acids
Module
ngf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ngf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FRF71_03800 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ngf01002
]
FRF71_03800 (dapE)
Enzymes [BR:
ngf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
FRF71_03800 (dapE)
Peptidases and inhibitors [BR:
ngf01002
]
Metallo peptidases
Family M20
FRF71_03800 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
QEA15334
UniProt:
A0A5B8S2G8
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All DBs
Position
757930..759069
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AA seq
379 aa
AA seq
DB search
MTSTALPPVLPLAEALIACPSVTPATGMVFDCLEGLLAPLGFAVHRFLAGEAPDGPVENL
FAIRRGPEGSRHFGFAGHLDVVPPGEGWTTGAFAPEVRGELLYGRGAVDMKGSIAAMVAA
ATGVPRDAGTISFIITGDEEGPARFGTVPLIDHMRAAGAIPDLILVGEPTSVNRLGDMMK
IGRRGSVNIWLTVEGGEGHVAYPHLANNPIGPLVNMLAELNALVLDEGSDWFQPSNLEIT
DITVGNPATNVIPARAHARLSIRFNDLHTGQGLVDMVSAIAEKHGGTARAVISGEAFLTP
PGDFSAMVARAVETETGVTPEASTTGGTSDARFLKALCPVIEFGLCNATMHKRDEAVAVP
DLDTLARIYARIATAALAG
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcaccgccctgcctcccgtcctgccgcttgccgaagcgctgatcgcttgcccc
agcgtaaccccggcgacgggaatggtgttcgattgcctggaaggcctgcttgcgccgctg
gggttcgcggtccatcgcttcctggcgggcgaagcgcccgacgggccggtcgagaacctg
ttcgcgatccgccgcgggccggagggcagtcgccacttcggttttgccggacacctcgat
gttgtgccgcccggcgagggctggaccaccggcgcttttgcgcctgaggtgcgcggcgag
ctgctttatggccgcggcgcggtcgatatgaagggttcgatcgcggcgatggtcgccgcc
gccactggcgtgccgcgggacgccggtacgatcagcttcatcatcaccggtgacgaggaa
ggcccggcgcgcttcgggaccgtgccgctgatcgatcatatgcgcgcggcgggtgccatt
cccgacctgatcctggtgggcgagccaaccagcgtgaaccgtctgggcgacatgatgaag
atcggccggcgcggctcggtcaacatctggctgacggttgaaggcggcgaaggccacgtt
gcctatccgcaccttgccaacaatccgatcggtccgctggtcaatatgctggccgaactg
aacgcgctggtgctcgacgaggggagcgactggttccagccttccaaccttgaaatcacc
gacatcactgtcggcaatccggccaccaatgtcattccggcgcgggcccacgcccgcctg
tcgatccgtttcaacgatctccacaccggtcagggcctggtcgacatggtcagcgccatt
gccgagaagcatggcggcacggcccgcgcggtcatttcgggtgaagcctttctgaccccg
ccgggagatttctccgccatggtcgcacgcgcggtcgaaaccgagaccggcgtgacgccc
gaagccagcaccacaggtggcaccagcgacgcgcggttcctcaaggcgctttgtccagtg
atcgaattcggcctgtgcaacgccaccatgcacaagcgcgacgaagccgtggccgtgcct
gacctcgacacgctggcgcggatctatgcccgcatcgcaactgcggcgctggcgggctga
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