Novosphingobium ginsenosidimutans: FRF71_04365
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Entry
FRF71_04365 CDS
T06189
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ngf
Novosphingobium ginsenosidimutans
Pathway
ngf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ngf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FRF71_04365 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngf03400
]
FRF71_04365 (ruvB)
Enzymes [BR:
ngf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FRF71_04365 (ruvB)
DNA repair and recombination proteins [BR:
ngf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FRF71_04365 (ruvB)
RecFOR pathway proteins
FRF71_04365 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_3
AAA_16
Sigma54_activat
AAA_22
nSTAND3
AAA_2
AAA_18
AAA_14
AAA_17
TsaE
Rad17
NTPase_1
RNA_helicase
AAA_28
AAA_33
AAA_25
Bac_DnaA
NB-ARC
ABC_tran
AAA_24
Sigma54_activ_2
NACHT
Parvo_NS1
IstB_IS21
PEPCK_ATP
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QEA15429
UniProt:
A0A5B8S1P5
LinkDB
All DBs
Position
complement(868146..869186)
Genome browser
AA seq
346 aa
AA seq
DB search
MTDNPLLSSTRQVEDADAALRPKSLDEFVGQAAAKDNLRVFIESARQRREAMDHVLFFGP
PGLGKTTLAQIVARELGVGFRATSGPVIAKAGDLAALLTNLEEGDVLFIDEIHRLNPQVE
EVLYPAMEDRALDLIIGEGPSARSVRIDLPPFTLVGATTRQGLLTTPLRDRFGIPVRLNF
YTEQELERVVTRGAGLLGIGIEPAGAREIARRSRGTPRIAGRLLRRVRDFAHVEGHAAIT
QSQADSALTRLEVDNLGLDAMDRRYLTMIAEFYNGGPVGVETLAAGLSEPRDTIEDVIEP
YLIQLGLVARTARGRCLNARAWQHLGLAPPAGNQGGLFDSADPTDK
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaacccgctcctctcctccacccgccaggttgaagacgccgacgcggcgctt
cggccgaagtcacttgatgagttcgtggggcaggcggcggcgaaggataacctgcgggtg
ttcatcgaatctgcgcggcaacggcgtgaggcgatggaccatgtgttgttcttcggcccg
cccggcctcggcaagacgacgctggcgcagatcgtggcgcgcgagctgggcgtgggtttc
cgcgcgacctccggcccagtgatcgccaaggcgggcgatctggcggcgctgctgaccaac
ctggaagagggcgacgtcctcttcattgacgagattcaccggctcaatccgcaggtcgag
gaagtgctttatccggcgatggaggaccgcgcgctggatctgatcattggcgaggggccc
tcggcgcgctcggtgcggatcgacctgccgcccttcacgctggttggcgcgaccacccgg
caggggttgctgaccacaccgctgcgcgaccgtttcgggatcccggtacggctgaacttc
tataccgaacaggagctggagcgggtcgtgacgcgcggcgcaggcttgctcgggatcggc
attgagccggccggcgcgcgcgagattgcgcggcgatcgcgtgggacgccgcggatcgcc
gggcggctgctgcgccgggtgcgcgactttgcccatgtcgagggtcatgccgcgatcacg
cagagccaggctgactcagcgttgacccggctggaggtcgataacctcgggcttgacgcg
atggaccggcgttacctcaccatgattgccgaattctacaatggcgggccggtcggcgtg
gaaacgctggcggccggcttgtccgaaccgcgcgacacgatcgaggatgtgatcgaaccc
tatctgatccagcttggactggtcgcgcggacggcgcgcggacgttgcctcaatgcgcgg
gcctggcagcaccttggcctggcgccacctgcagggaaccagggcggcctgttcgattcc
gctgatccgacagacaaatag
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