Novosphingobium ginsenosidimutans: FRF71_04795
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Entry
FRF71_04795 CDS
T06189
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
ngf
Novosphingobium ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:
ngf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ngf01002
]
FRF71_04795
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ngf01011
]
FRF71_04795
Peptidases and inhibitors [BR:
ngf01002
]
Cysteine peptidases
Family C82
FRF71_04795
Peptidoglycan biosynthesis and degradation proteins [BR:
ngf01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FRF71_04795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
DUF3318
Motif
Other DBs
NCBI-ProteinID:
QEA17463
UniProt:
A0A5B8S7S1
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All DBs
Position
complement(950993..952438)
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AA seq
481 aa
AA seq
DB search
MVGHGWAVWRTARGVSGLALALAAGAAVAQANRAPENILPAPKPAAPATPVPPVNQQPAV
PAPSSQQPATTPPVTTPAPAAPVIEPDLSVVEPVLAWQVADAQALAKVIDGIGAHGLIPA
DYQLTDLRAAILAGPGAALDAQASRSFAWLIEDMRDGRTRYDSRHQWFVVDPDVDARPTA
TVMAEALASKDIAGAIASLAPTHPDYAKLKEALAKTPAADKATRALIQVNLDRWRWLPRD
LGKFYLLTNVPEFQLRLTVDNEIIRSYRTIVGKPGRTATPQLAEVVEGVVFNPTWTVPQS
IVKGENLGAQLLANPARAKRENYKVTKNKDGSVTVVQQPGPNNALGLMKLDMPNEHAIFL
HDTPNRNLFKLAQRALSHGCVRTERATELAITMAILGAGVTPDDAVAIVTSGKYTRVAMT
RTFPVYLTYFTMASDITGKMGTFNDLYGRDAPVLASFAAPRAPWDGKRQSTEKVIKLDNP
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggttgggcatggctgggcagtttggcggacggcacgcggcgtctctggcctggcgctg
gcactcgcggccggggcggcagtggcccaggcaaatcgcgcacccgaaaatatcctgcca
gcccctaagccggcggcgccggcaaccccggtgccgccggtcaaccagcaacccgctgtt
cctgcaccgagcagccagcagccggccactaccccgccagtcaccaccccggcgcccgcc
gccccggtgatcgagcccgacctctcggtggtcgaaccggtcctggcctggcaggtggcg
gacgcccaggcgctggccaaggtgatcgatgggatcggtgcgcacggcctgattccggca
gactatcagctgaccgacctgcgcgccgcgatcctggccggtcccggtgccgcgcttgac
gcccaggccagccgatcgttcgcctggctgatcgaggacatgcgcgatggccgcacgcgc
tatgattcgcgccaccagtggttcgtcgtcgatcccgatgtcgatgcgcggccgacggcg
accgtgatggccgaggcgctggccagcaaggatattgccggcgcgattgccagcctggcc
ccgacccatccggactatgccaagcttaaggaagcgcttgccaagaccccggcggccgac
aaggcgacccgcgcgctgatccaggtgaacctggatcgctggcgctggctgccacgcgac
ctcggtaagttctacctgctgaccaacgtgccggaattccagctgcggctgacagttgat
aacgaaatcatccgctcctaccgcacgatcgttggcaaaccgggccgcacggcgacgccg
cagctcgccgaagtggtcgagggggtggtcttcaacccgacctggaccgtgccgcagtcg
atcgtgaagggtgagaacctgggcgcacagctcctcgccaacccggcgcgggcgaagcgc
gagaactataaggtcaccaagaacaaggatggttcggtcactgttgtccagcagcccggg
ccgaacaatgcgcttgggctgatgaagctcgacatgccgaacgagcacgcgattttcctc
cacgacacgcccaatcgcaacctgttcaagctggcccagcgggcgctgagccatggctgc
gtgcgaaccgagcgcgcgaccgaactggcgataacgatggcgatcctgggtgcgggcgtg
acgccggacgatgccgtggcgatcgtcacctcgggcaagtacacccgcgtcgccatgacc
cggactttcccggtctatctgacctatttcaccatggcgtctgacattaccggcaagatg
ggcaccttcaacgacctctacggccgcgacgcccccgtcctcgccagcttcgccgccccc
cgcgccccgtgggacggcaagcgtcagtcgaccgagaaggtgatcaagctggataatcca
ttgtga
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