Novosphingobium ginsenosidimutans: FRF71_05045
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Entry
FRF71_05045 CDS
T06189
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ngf
Novosphingobium ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:
ngf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngf03032
]
FRF71_05045 (ihfB)
03036 Chromosome and associated proteins [BR:
ngf03036
]
FRF71_05045 (ihfB)
03400 DNA repair and recombination proteins [BR:
ngf03400
]
FRF71_05045 (ihfB)
DNA replication proteins [BR:
ngf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FRF71_05045 (ihfB)
Chromosome and associated proteins [BR:
ngf03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
FRF71_05045 (ihfB)
DNA repair and recombination proteins [BR:
ngf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
FRF71_05045 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QEA15553
UniProt:
A0A5B8S2L6
LinkDB
All DBs
Position
1000362..1000643
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AA seq
93 aa
AA seq
DB search
MIRSELLQALARDNPGLRAEEVEKVVDTFFEEIETRLAQGGRVELRGFGAFSTRERDPRQ
GRNPRTGASVAVPGKKVPYFKPGKEMRARLNAD
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgataagatccgaactgctgcaggcgctcgcccgcgataatcctggcctccgcgccgaa
gaggtcgaaaaggtggtcgacaccttctttgaggaaatcgagacgcggctggcccagggt
ggccgggtcgaactgcgcggctttggagccttttcgacccgcgagcgtgacccccgccag
ggccgcaacccgcgcaccggcgccagcgttgcggtgccgggcaagaaggtgccctatttc
aagcccggcaaggaaatgcgcgcgcgcctgaacgcggactaa
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