Novosphingobium ginsenosidimutans: FRF71_06100
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Entry
FRF71_06100 CDS
T06189
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ngf
Novosphingobium ginsenosidimutans
Pathway
ngf03030
DNA replication
ngf03430
Mismatch repair
ngf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ngf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FRF71_06100 (dnaQ)
03430 Mismatch repair
FRF71_06100 (dnaQ)
03440 Homologous recombination
FRF71_06100 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngf03032
]
FRF71_06100 (dnaQ)
03400 DNA repair and recombination proteins [BR:
ngf03400
]
FRF71_06100 (dnaQ)
Enzymes [BR:
ngf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FRF71_06100 (dnaQ)
DNA replication proteins [BR:
ngf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FRF71_06100 (dnaQ)
DNA repair and recombination proteins [BR:
ngf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FRF71_06100 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QEA15743
UniProt:
A0A5B8S352
LinkDB
All DBs
Position
complement(1205874..1206560)
Genome browser
AA seq
228 aa
AA seq
DB search
MREIIFDTETTGLDPRNGDRLVEIGCVEMVNRVTTGETFHCYLNPDRDMPAAAEAVHGLS
ATFLSDKPRFHEKAAEFLEFIGDSMLVAHNAGFDFGFINMELEKCGLDPLGRERMIDTVA
LARIRHPGAKNSLDALCTRYGIDRSHRTLHGALLDAELLAQVYVELTGGRQIGLHLAVDN
AAADLAEPVMRVQRERPFRAARPHAASEEERAAHAQFLDTLKEPLWRT
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagatcatcttcgacaccgaaaccacggggcttgatcccaggaacggtgaccgg
ctggtggaaatcggctgcgtcgaaatggtcaaccgggtgacaaccggcgaaacctttcac
tgctatctcaatcctgatcgcgatatgccggctgcggccgaagcggtgcacggcctgtcc
gccaccttcctttcggacaagccccgctttcacgagaaggccgccgaattccttgagttc
atcggcgattcgatgttggtcgcgcacaatgccgggttcgatttcggcttcatcaacatg
gagctcgaaaaatgcgggctcgatccgctggggcgcgagcggatgatcgatacggtcgcg
ctcgcccggatccgccacccgggggccaagaactcgcttgatgcgctttgcacccgctat
ggcatcgaccgcagccatcgcacgctgcacggcgcattgcttgacgccgagctgctggcc
caggtctatgtcgagctgaccggtgggcgccagattggcctgcacctggcggtcgataat
gctgcggcagacctggccgagccagtcatgcgggttcagcgcgagcggccgtttcgcgcc
gcgcggccccacgctgccagcgaggaagagcgtgccgcccatgcccagtttctcgacacg
ctcaaggagccgctctggcgaacatga
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