Novosphingobium ginsenosidimutans: FRF71_06565
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Entry
FRF71_06565 CDS
T06189
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ngf
Novosphingobium ginsenosidimutans
Pathway
ngf00521
Streptomycin biosynthesis
ngf00523
Polyketide sugar unit biosynthesis
ngf00525
Acarbose and validamycin biosynthesis
ngf00541
Biosynthesis of various nucleotide sugars
ngf01100
Metabolic pathways
ngf01110
Biosynthesis of secondary metabolites
ngf01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ngf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FRF71_06565 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FRF71_06565 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
FRF71_06565 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FRF71_06565 (rfbB)
00525 Acarbose and validamycin biosynthesis
FRF71_06565 (rfbB)
Enzymes [BR:
ngf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
FRF71_06565 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
adh_short
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
QEA15831
UniProt:
A0A5B8S2Z9
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Position
complement(1304563..1305618)
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AA seq
351 aa
AA seq
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MKILVTGGAGFIGSALIRHLIGESVHDVLNLDKLTYAGVLTSLAEVDSNPRYRFVQGDIC
DPDLVASLLAEFQPDVVAHLAAESHVDRSIDGPGEFIQTNVVGTFTMLQQALGYWQSLPA
ERQAAFRFHHISTDEVYGSLGDEGLFTESTAYDPRSPYSASKAASDHLVRAWGHTYGLPV
LVTNCSNNYGPYHFPEKLIPLIIIRALAGEPLPVYGDGSNVRDWLFVEDHARALRRVFEA
GVPGETYNIGGNSERRNIEVVRAICSALDARCPREDGKSYAEQITFVADRPGHDQRYAID
AAKIARELGWKPEVRFEDGITQTVDWFLTRKDWWEPILQRRYATERLGLKG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcgttaccggcggcgctggcttcatcggctctgctctgatccggcacctg
atcggcgagagcgtgcacgacgtgctgaatctcgacaagctgacctatgccggggtgctc
acttcgctcgcagaggtggacagcaatccgcgctatcgctttgtccagggcgacatttgc
gatccggacttggtcgccagtctgctggccgaattccagcccgatgtagtcgcacacctc
gcggccgaaagccatgttgaccgatcgatcgatggtccgggtgaattcatccagaccaac
gtggtgggaaccttcacgatgttgcagcaggcgttgggatattggcaatccctgccggcc
gaacggcaggcggctttccgctttcaccacatctcgacggacgaggtctacggatcgctc
ggcgatgaaggccttttcacagaaagcaccgcctacgatccccgctcaccatattcagca
tcaaaagccgcctcggaccatctcgtccgggcttggggccatacctatggcttgccggtg
ctagtcaccaattgctccaacaactacggcccctatcacttccccgaaaaactcatcccg
ctgatcattattcgcgcgctcgccggtgaaccactgccggtttatggtgacggatcgaac
gtgcgcgactggctgtttgtcgaggatcacgcgcgtgcgctgcgacgggtatttgaagct
ggggttccgggtgagacctacaacatcggcggcaattcggagcgccggaacatcgaagta
gtgcgtgccatctgctcagcgctcgatgctcggtgcccacgcgaagacgggaagtcttat
gccgagcagatcaccttcgttgccgaccggcctgggcatgaccagcgctatgccatcgac
gccgccaagatcgcacgcgaattgggctggaaaccagaagtgcggtttgaggacggcatt
acccagactgttgactggttcctcacccgcaaggactggtgggagccaatcctgcaacgc
cgctacgccaccgagcgactgggtctgaagggttga
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