Novosphingobium ginsenosidimutans: FRF71_07190
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Entry
FRF71_07190 CDS
T06189
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ngf
Novosphingobium ginsenosidimutans
Pathway
ngf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ngf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FRF71_07190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngf03400
]
FRF71_07190
Enzymes [BR:
ngf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FRF71_07190
DNA repair and recombination proteins [BR:
ngf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FRF71_07190
Prokaryotic type
FRF71_07190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QEA17501
UniProt:
A0A5B8S7G4
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All DBs
Position
1422661..1423347
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AA seq
228 aa
AA seq
DB search
MANGDAVPESWRAVLDPVLASPKSRQLGGFLKAEEAAGKAIYPPRGTRLAALELTPLDTV
KVVILGQDPYHGPGQAHGLSFSVQDGVKVPPSLVNIYKELASDLGLAVPRHGNLTHWARQ
GVLLLNAALTVEDGQPASHQGRGWEEITDAVVAAVAAKADPCVFLLWGSHAQRKAQSVPG
LMQSHHLVLTAPHPSPLSAHRGFLGCRHFSQANAFLDAKGRGGVDWAL
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatggcgatgcagtccccgaaagctggcgtgcggtgctcgatccggtcctggcc
agcccgaagtcacgccagctcggcggcttcctgaaggccgaggaagcggcaggaaaggcg
atctatccgccgcgcggaacccgcctcgccgcgctcgagctgacgccgctggacaccgtg
aaggtcgtgatcctggggcaggatccctaccacggccccggccaagcccacggcctgtcg
ttctcggtacaggacggggtgaaggtgccgcccagcctggtcaacatctacaaggaactg
gcgagcgacctgggccttgccgtgccccgacacggcaacctgacccactgggcgcggcag
ggcgtgctgctgctcaatgccgcgctgacggtggaggacggccagccagcctcgcaccag
gggcgcgggtgggaagagatcaccgacgccgtggtcgccgccgttgccgccaaggctgac
ccttgcgtcttcctgctgtggggcagccatgcccagcgcaaggcgcagtcggtgccggga
ctgatgcagagccatcacctggtgctgaccgccccgcatcccagcccgctctcggcccac
cgcggcttcctggggtgccggcacttcagccaggccaatgccttcctagacgccaagggc
cggggcggggtggactgggcgctctga
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