Novosphingobium ginsenosidimutans: FRF71_07275
Help
Entry
FRF71_07275 CDS
T06189
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ngf
Novosphingobium ginsenosidimutans
Pathway
ngf03030
DNA replication
ngf03410
Base excision repair
ngf03420
Nucleotide excision repair
ngf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ngf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FRF71_07275 (polA)
03410 Base excision repair
FRF71_07275 (polA)
03420 Nucleotide excision repair
FRF71_07275 (polA)
03440 Homologous recombination
FRF71_07275 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngf03032
]
FRF71_07275 (polA)
03400 DNA repair and recombination proteins [BR:
ngf03400
]
FRF71_07275 (polA)
Enzymes [BR:
ngf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FRF71_07275 (polA)
DNA replication proteins [BR:
ngf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FRF71_07275 (polA)
DNA repair and recombination proteins [BR:
ngf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FRF71_07275 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FRF71_07275 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DprA_N
HHH_5
HHH_2
HAMP_N3
Motif
Other DBs
NCBI-ProteinID:
QEA15951
UniProt:
A0A5B8S3E4
LinkDB
All DBs
Position
complement(1446260..1449109)
Genome browser
AA seq
949 aa
AA seq
DB search
MEPKQHLYLVDGSAYIFRAYHRLPPLTNPQGVPVGAVYGYTTMLWKLADDLHKADGPTHL
AVILDASGKSFRNDIYDQYKANRPPPPEDLKPQFPLIRDATRAFSLPCIEEQGLEADDLI
ASYARAATERGWDVTIVSSDKDLMQLVGKCKHGEDGEACIDMLDTMKNQRIDVPEVIEKF
GVPPELVGDVLALMGDSVDNVPGIRGIGPKTATKLIQEHGSLEAALAAAPDMKPSKLRDS
LIEQAEMARLSRVLVQLKEDCPLPVALDDFKLDTIPPDPLAAFLEEHGFNSLLKRLGDGR
GSPERRVDLNPAKPVTAGAAPTAGSSRQPLPELPPIDRSKYVCVQDEPTLAAWIERAMAA
RLVAFDTETSSIDAMRAELAGISLALGPGDACYIPLGHGGTDMFAERPAQVEKTRALALL
RPLLESEAVLKIGQNAKYDLNILARHGIDVGPVDDTMVMSFDLDAGRSMDGIGGGHGMDE
LAARHLGHTTLTFKDICGSGKKTIPFGEVPLDRATEYAAEDAEVTWRLHRLLKPRLSEEG
ATRVYERVDRPLVPVVAQMERHGIRVDRDKLAGLSATFAEEIAKLEGQIHELAGQPFTIG
SPKQLGEILFDKLGFKGGKKGKTGQYSTDQGILERLSGEGAAIADRVLEWRQLSKLRSTY
TEALQAAINPETGRVHTSYSLVGAQTGRLSSTEPNLQNIPIRTELGRQIREAFVAEPGNV
LLAADYSQIELRLAAHMADVPALKEAFAEGEDIHARTAMEMFGEVNRDTRGRAKTINFAI
LYGISRWGLGGRLGVPADEAQAMIDRYFERFPGIRHYIHSTLESVRANGYSETLFGRKCW
FPRISSNNPNERAGSERAAINAPIQGTSADIIKRAMVRMMPALEAAGLSHVRMLLQVHDE
LVFELPEADVPAASKVIEAVMAGAAEPAVPLSVPLGVEIGTGLSWGAAH
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaagcagcatctctatctggtcgatggatcggcctatatcttccgcgcctat
caccgcctgccgccgctgaccaacccgcagggcgtgccggtaggcgcggtctatggctac
accaccatgctgtggaagctggccgacgatctgcacaaggccgatgggccgacccacctc
gcggtgattctggatgccagcggcaagagtttccgcaacgatatctatgatcagtacaag
gccaaccggccgcctccgcccgaggatctcaaaccacagttcccgctgatccgcgatgcc
acccgcgccttcagcctgccctgcatcgaggaacagggtctggaagcggatgacctgatc
gcctcctatgcccgcgccgcgaccgaacgcggctgggacgtgaccattgtctcgtccgac
aaggacctgatgcagctggtcggcaagtgcaagcatggcgaggacggcgaagcctgtatc
gacatgctggacacgatgaagaaccagcggatcgacgtgcccgaggtgatcgagaagttc
ggcgttccgcccgaactggtgggcgatgtcctggcgctgatgggcgattcggtcgacaac
gtccccggcatccgcgggatcggtcccaagaccgcaaccaaactgattcaagagcatggc
agcctcgaagccgcgctcgccgcagcgcccgacatgaagccttcgaaactgcgcgacagc
ctgatcgagcaggccgagatggcgcggctcagccgggtgctggtgcagttgaaggaagat
tgcccgctgccggtcgcgcttgacgatttcaagctcgatacgatcccgcccgatccgctt
gcggccttcctagaggaacacggtttcaattcgctgctgaagcggctgggtgacgggcgg
ggcagccccgaacggcgggttgacctcaatcccgccaagccggtcacggctggcgctgcg
ccgactgccggcagcagccgccagcccctgcccgagctgccgccgatcgatcgcagcaag
tacgtttgcgtgcaggatgagccgacgctggcggcctggatcgagcgggccatggccgcg
cggctggtcgccttcgatacggagaccagctcgatcgacgcgatgcgggccgagctggcc
gggatcagcctggcgctggggccaggcgatgcctgctacatcccgctcggccacggcggg
accgacatgtttgccgagcgcccggcccaggtggagaagacccgcgccctcgcgctgcta
aggcccctgctggaaagcgaggcggtgctgaagatcgggcagaacgccaaatatgatctc
aacatccttgctcgtcacggtatcgatgtcggtccggtcgacgatacgatggtgatgagc
ttcgacctcgacgccggccgctcgatggatgggatcggtggcgggcacgggatggacgag
cttgccgcccgccatctcggccacaccacgctgactttcaaggacatctgcggcagcggc
aagaagaccatcccgttcggcgaggtgccactggaccgcgccaccgaatatgctgccgag
gatgccgaagtgacctggcgcctgcaccgcctgctcaagccgcgcctgtccgaagagggc
gcgacccgcgtctacgagcgggtcgatcgcccgctggtgccggtggtggcgcagatggaa
cgccacggcatccgcgtcgaccgtgacaagctggcgggcctatccgccactttcgcggag
gagatcgctaagcttgaaggccagattcacgagctggccggccagcccttcaccattggc
agccccaagcaattgggcgagatcctgttcgacaagctgggtttcaagggcggcaagaag
ggcaagaccggccagtattcgaccgaccagggcatccttgagcggctgtccggcgaaggc
gcagcgattgccgacagggtgcttgaatggcgccagctctccaagctgcgctcgacctat
accgaagccttacaggcggcgatcaaccccgagaccggccgggtccacaccagctacagc
ctggttggcgcgcaaaccgggcggctctcatcgaccgagccgaatctccagaacatcccg
atccgcaccgaactgggccgccagatccgcgaggcctttgtggcagagcctggcaatgtc
ctgcttgccgccgactacagccagatcgaactgcgccttgccgcgcacatggccgatgtc
cctgcactgaaagaggcctttgcggaaggagaggacattcacgcccgcacggccatggaa
atgttcggcgaggtcaaccgcgacacccgcggccgcgccaagacgatcaacttcgcgatc
ctctacggcatttcgcgctggggcctgggcgggcggctgggcgtgccggccgacgaggcg
caggcgatgatcgaccgctatttcgagcgcttcccgggcatccgccactatatccactcg
acactagagagcgtgcgggcgaacggctattcggagactctgttcggccgcaaatgctgg
ttcccacggatcagctccaacaaccccaacgaacgcgccggctccgaacgcgccgcgatc
aacgccccgatccaaggcaccagcgccgacatcatcaagcgcgcgatggtgcggatgatg
cccgcgctggaagcggcgggcctgagccatgtccggatgctgctgcaggttcacgacgaa
ctggtgttcgagctgcccgaagctgacgtgccggcggcgagcaaggtgatcgaagcggtg
atggctggtgcggctgaaccagcggtgcccttgtcagtaccgctgggcgtcgagatcggc
accggcctgagctggggcgccgctcactga
DBGET
integrated database retrieval system
