Novosphingobium ginsenosidimutans: FRF71_07315
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Entry
FRF71_07315 CDS
T06189
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ngf
Novosphingobium ginsenosidimutans
Pathway
ngf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FRF71_07315 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngf03019
]
FRF71_07315 (groL)
03110 Chaperones and folding catalysts [BR:
ngf03110
]
FRF71_07315 (groL)
03029 Mitochondrial biogenesis [BR:
ngf03029
]
FRF71_07315 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngf04147
]
FRF71_07315 (groL)
Enzymes [BR:
ngf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FRF71_07315 (groL)
Messenger RNA biogenesis [BR:
ngf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FRF71_07315 (groL)
Chaperones and folding catalysts [BR:
ngf03110
]
Heat shock proteins
HSP60 / Chaperonin
FRF71_07315 (groL)
Mitochondrial biogenesis [BR:
ngf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FRF71_07315 (groL)
Exosome [BR:
ngf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FRF71_07315 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FRF71_07315 (groL)
Exosomal proteins of breast cancer cells
FRF71_07315 (groL)
Exosomal proteins of colorectal cancer cells
FRF71_07315 (groL)
Exosomal proteins of bladder cancer cells
FRF71_07315 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
Motif
Other DBs
NCBI-ProteinID:
QEA15958
UniProt:
A0A5B8S484
LinkDB
All DBs
Position
complement(1458762..1460405)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFGRDARERILAGVDILANAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEI
ELKDKFENMGAQMLREVASKTNDQAGDGTTTATVLAQAIVREGMTAVAAGMNPMDLKRGI
DLAVTAVVADLVKRSKPVSGSSEIAQVGIISANGDSEVGNKIAEAMEKVGKEGVITVEEA
KGLEFELDVVEGMQFDRGYLSPYFITNPEKMTVELDNPYILIHEKKLSSLQSMLPILEAV
VQSGRPLLIIAEDIEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTKGEM
ISEDLGIKLETVTLGMLGQAKKVTIDKDNTTIVDGAGPADEIKARVEQIRAQIETTSSDY
DKEKLQERLAKLAGGVAVIKVGGASEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALL
YATKALEGMKGANDDQTKGIDIVRRAITAPVKQIATNAGHDGAVVSGNLLRENDETQGFN
AATDTYENLVAAGVIDPTKVVRTALQDAASVAGLLITTEAAISEKPEDKPAMPPMGGGMG
GMGGMDF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggacgtaaaattcggccgcgacgcgcgtgagcgcattctcgctggcgtc
gacatcctcgccaacgcggtgaaggtcaccctgggccccaagggccgcaatgtcgtgatc
gacaagagcttcggcgcaccgcgcatcaccaaggacggcgtttcggtcgccaaggaaatc
gaactgaaggacaagttcgaaaacatgggcgcccagatgctgcgcgaagtcgccagcaag
accaacgaccaggcaggtgacggcaccaccaccgccaccgtactggctcaggccatcgtg
cgcgaaggcatgaccgccgttgccgccggcatgaacccgatggacctgaagcgcgggatc
gatctggccgtgaccgccgtggtcgcggacctggtcaagcgctccaagccggtttcgggc
tcgtcggaaatcgcccaggtcgggatcatctcggccaatggcgacagcgaagttggcaac
aagattgccgaagccatggaaaaggtcggcaaggaaggcgtgatcaccgtggaagaggcc
aagggcctcgaattcgaactcgatgtcgttgaaggcatgcagttcgaccgcggctacctc
tcgccctacttcatcaccaacccggaaaagatgacggtcgagctggataacccgtacatc
ctgatccacgagaagaagctgtcgtcgctccagtcgatgctgccgatccttgaggccgtg
gtccagtcgggccgtccgctgctgatcatcgctgaagacatcgaaggcgaagcgctggcc
accctggtggtcaacaagctgcgcggcggcctgaagatcgccgccgtcaaggcaccgggc
ttcggcgatcgccgcaaggccatgctgcaggacatcgcgatcctgaccaagggtgagatg
atcagcgaagacctgggcatcaagcttgaaacggttacgctcggcatgctcggccaggcc
aagaaggtcactatcgacaaggacaacaccaccatcgtcgatggcgccggtccggccgac
gagatcaaggcccgcgtcgaacagatccgcgcccagatcgaaaccaccagcagcgattac
gacaaggaaaagctgcaggaacgtctggccaagctggctggcggcgtggccgtgatcaag
gtcggcggcgcttcggaagtcgaagtgaaggagcgcaaggaccgcgtcgacgacgccctg
cacgccacccgcgctgcggtggaagaaggcatcgtccctggcggcggtaccgcgctgctc
tatgccaccaaggcactggaaggcatgaagggcgccaacgacgaccagaccaagggcatc
gacatcgtgcgccgcgcgatcactgccccggtcaagcagatcgccaccaacgccggccat
gacggcgccgtggtgtcgggcaacctgctgcgcgaaaatgatgaaacccagggcttcaac
gctgcgaccgacacctatgaaaacctggttgcggccggcgtgatcgacccgaccaaggtc
gtccgcactgccctgcaggatgccgcctcggtcgccggcctgctgatcaccaccgaagcg
gcgatcagcgaaaagccggaagacaagcccgccatgccgccgatgggtggcggaatgggc
ggcatgggcggtatggacttctaa
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