Novosphingobium ginsenosidimutans: FRF71_08025
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Entry
FRF71_08025 CDS
T06189
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
ngf
Novosphingobium ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:
ngf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ngf01002
]
FRF71_08025
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ngf01011
]
FRF71_08025
Peptidases and inhibitors [BR:
ngf01002
]
Cysteine peptidases
Family C82
FRF71_08025
Peptidoglycan biosynthesis and degradation proteins [BR:
ngf01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FRF71_08025
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
Motif
Other DBs
NCBI-ProteinID:
QEA16085
UniProt:
A0A5B8S6M7
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All DBs
Position
1598889..1600190
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AA seq
433 aa
AA seq
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MGAVAANPAQARGPAAASEPASDRGLRAEIGKRVGKDLRGFYAARGNRPLWIGADGRVLS
AAAILLGQIETAELDGVKPKSLKPSNLKDALADARAGDVESLAKAELTASQAYVRFVQAL
RKAPHAPMIYETEALAPVVPTPNAALQRAASAKALIGYLQDMGWMHPFYAPLRAALGKPG
YSAEQRQVIQLNMERVRALPPIAEGRWVLVDAASARLWMYDGSRLAGTMKVVVGKPETQT
PAMAGFLRYAIVNPYWNLPDDLMPSRITEKVIANGPGYVKAGGYQLLASWDDDAPVLDPA
KVDWQAVAARQQPLRARQLPGPGNFMGAVKFMFPNEQGIYLHDTPERDLLTKEARFYSNG
CVRLEQASKLGRWLLGKPLPRSKTPEKRVELPVPVPIYITYLTAAPEGATIRFRPDTYGR
DTVRTQVAVQQPR
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgggggcagtcgctgcgaatccggcgcaggcgcgcggtccagcagccgcttcggaaccc
gccagcgaccgcgggctgcgcgccgagatcggaaagcgcgtcggcaaggatctgcgaggc
ttctatgcagcccgagggaatcgcccgctctggattggcgcggacgggcgtgtcctgtcc
gccgcagccatactgctaggccagattgaaacggccgaactcgacggcgtgaagccgaag
agccttaaaccgagtaacctgaaggacgcgctggcggatgcccgtgccggcgacgttgag
agcctggccaaagccgagcttactgcctctcaggcctatgtccgcttcgtccaggcgctg
cgcaaggcaccgcacgcgccgatgatctatgaaaccgaagcactggcgccggtcgtgccg
acccccaatgcggcgctgcaacgcgcggcctcggcgaaggcgctgatcggctacctgcag
gacatgggctggatgcacccgttctatgccccgcttcgcgccgcgcttggtaagcccggt
tacagcgcagagcagcgccaggtgatccagctcaacatggaacgggtgcgtgccttaccg
ccgattgcagaagggcgctgggtgctggtcgacgccgccagcgcgcggctgtggatgtac
gacggcagcaggctggccggcacgatgaaggtggtggtcggcaagccagagacccagacg
ccggccatggccgggttcctgcgctacgccatcgtcaatccctattggaacctgcccgac
gacctgatgcccagccggatcaccgaaaaggtgatcgccaacggccctggttatgtgaag
gctggcggctatcagctccttgccagctgggatgacgacgcgccggtgctcgatcccgcc
aaggttgattggcaggcggtcgctgctcgccaacagcccttgcgggcacgccagttgcct
gggccgggcaacttcatgggggcggtcaaattcatgttcccgaacgagcaaggcatatac
ctgcacgacacgccggagcgggacctgctgaccaaggaagcgcgattctacagcaatggc
tgcgtgcggttggagcaggccagcaagctgggccgctggctgctgggcaaaccgctgccg
cgctccaagacgcccgagaagcgggtcgagctgccggtgccggttccgatctacattacc
tacctgactgccgcgccagaaggtgccacgatccgattccggcccgatacctatggccgc
gacacggtccgcacgcaggttgccgtccagcagccgcgctga
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