Novosphingobium ginsenosidimutans: FRF71_09905
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Entry
FRF71_09905 CDS
T06189
Symbol
pspF
Name
(GenBank) phage shock protein operon transcriptional activator
KO
K03974
psp operon transcriptional activator
Organism
ngf
Novosphingobium ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:
ngf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngf03000
]
FRF71_09905 (pspF)
Transcription factors [BR:
ngf03000
]
Prokaryotic type
Other transcription factors
Others
FRF71_09905 (pspF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
Mg_chelatase
AAA_5
AAA_16
HTH_28
HTH_50
AAA_2
AAA
MCM
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QEA16419
UniProt:
A0A5B8S4E3
LinkDB
All DBs
Position
1988498..1989535
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AA seq
345 aa
AA seq
DB search
MERDTQFIGQSGAFLDAVERTSRAAPLRRPVLVIGERGTGKELIAERLHQLSKRWAEPLI
TLNCAALPETLIEAELFGHEAGAFTGATRARAGRFEEADQGTLFLDELATLSMGAQERLL
RAVEYGEVTRIGASKPVRVDVRIVAATNEDLPRLAEEGRFRSDLLDRLSFEVITLPPLRV
REGDIRVLAEYFGRRMASELRWEDWPGFSDAAMEQLENYQWPGNVRELRNVVERAVYRWD
DWGTPVSHIVFDPFDSPWKPAPMVTADSGRAPGAPSPTHSAPAPSVQLDAISDLKAAVDA
HERAIVEQALNRHRYNQRQTAKALGLSYDQLRHCMKKHGLMERGG
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtgacacccagttcattggccagtccggagccttcctcgacgcggtggaacgc
acaagccgagctgccccgcttcgccgcccagtgctggtcattggtgagcgcggcaccggc
aaggaattgatcgccgaacgcctccaccagctgagcaagcgctgggccgagccgctgatc
acgctgaactgcgcggcgctgccggaaacactgatcgaggcggaattgttcggtcatgag
gcgggtgctttcaccggtgctaccagagcccgggccgggcggttcgaggaagccgaccaa
ggcacgctattcctcgacgaactggcgacgctcagcatgggcgcgcaggaacggctgctg
cgcgcggtcgaatatggcgaggtaacccgaatcggagcatccaagccggtgcgggtcgat
gtccgcatcgttgccgccaccaacgaagacctaccgcgcctggccgaagaaggccggttc
cgctccgacctgcttgaccggttgagctttgaggtgatcaccctgccgccgctgcgggtg
cgcgagggggatatccgcgtcctcgccgaatacttcggccgccgcatggccagcgagctg
cgctgggaagactggccgggcttttccgatgcggcgatggagcagctcgaaaactaccag
tggcctggcaatgtgcgcgaactgcgcaacgtggtggaacgtgcggtctatcgctgggat
gactggggcacgcccgtctcgcatatcgtgttcgatccgttcgacagcccgtggaagccg
gcacctatggtgacggcggacagcggccgggcgccgggtgcgccatcgccgacccattcg
gccccggcaccctcggtccagctcgatgcgatcagcgatctcaaggccgcggtcgatgcg
cacgaaagggcgattgtcgaacaggcgctcaaccgccaccgctacaaccagcgccagacc
gccaaggcgctgggcctcagctatgaccagctgcgccactgcatgaagaagcacgggctg
atggagcggggcggatag
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