Novosphingobium ginsenosidimutans: FRF71_09955
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Entry
FRF71_09955 CDS
T06189
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ngf
Novosphingobium ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:
ngf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ngf03016
]
FRF71_09955 (truB)
Enzymes [BR:
ngf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FRF71_09955 (truB)
Transfer RNA biogenesis [BR:
ngf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FRF71_09955 (truB)
Prokaryotic type
FRF71_09955 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QEA16427
UniProt:
A0A5B8S6Y9
LinkDB
All DBs
Position
1997884..1998783
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AA seq
299 aa
AA seq
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MPHGWIILDKPLGLGSTQAVGAVKRVCREAGLGKVKVGHGGTLDPLASGVLPIALGEATK
LCGRMLDASKVYAFTVQFGTETDTLDLEGKVIAESPVRPALADIEAVLPRFTGHIEQVPP
AYSALKVDGMRAYDLARKGAAVELQSRAVTIHSLHREAAEADSVTLIASVSKGTYIRSLA
RDIALALGTVGHVTMLRRLKAGPFGIDQAISLDKLNEVGKGAPLENVLLPLEAGLVDIPA
LDLGPEQASMVRQGRVLTGLPHTDGLHWARLGPIPIALVELSGGAATVVRGFNLSDVAE
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
ttgccgcacggctggatcatcctcgacaagccgcttgggcttggcagcacccaggcggtt
ggtgcggtaaagcgcgtctgccgcgaggcgggactgggcaaggtcaaggtcggccacggc
ggcacgctcgatccactggccagcggcgtcctgccgattgcgctgggcgaggcgaccaag
ctgtgcggacggatgctcgatgccagcaaggtctatgccttcacggtgcagtttgggact
gagaccgatacgctggaccttgaaggaaaggtgatcgcggaaagcccggtgcgcccggcc
ctggccgatattgaagccgtgctgccacgctttaccgggcatatcgaacaagttccgccg
gcctattccgcgctgaaggtcgatgggatgcgcgcctatgacctggcgcgcaagggcgcg
gcggtggaactgcaatcgcgggcggtgacgatccattcgctgcatcgcgaagccgcagag
gctgatagcgtcaccctgatcgcctcagtctcaaagggcacctatatccgcagccttgcc
cgcgacattgcgctggcgcttggcacggtcggccatgtcaccatgctgcgccgcctcaaa
gccgggccgttcgggatcgatcaggcgatttcactggacaaattgaacgaagtgggtaag
ggcgcgcctcttgagaacgtactcttgccgctggaggcagggctggtcgacatcccggct
cttgacctcggtccggaacaggcaagcatggtccgccagggccgggttctgaccggactg
ccccacaccgacgggctgcattgggcgcgactgggacctattcccattgcgctggtggag
ctttccggtggagccgcaacggtggttcgggggttcaatctttccgatgtcgcggagtaa
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