Novosphingobium ginsenosidimutans: FRF71_10730
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Entry
FRF71_10730 CDS
T06189
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ngf
Novosphingobium ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:
ngf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngf03400
]
FRF71_10730
Enzymes [BR:
ngf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FRF71_10730
DNA repair and recombination proteins [BR:
ngf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FRF71_10730
Prokaryotic type
FRF71_10730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF5848
DUF6566
Motif
Other DBs
NCBI-ProteinID:
QEA16568
UniProt:
A0A5B8S637
LinkDB
All DBs
Position
2161348..2162718
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AA seq
456 aa
AA seq
DB search
MSAPIIVWLRRDLRLADQPAFRAAAARGPVIPVYVLDDESPRYRRMGAASRWWLHHSLAR
LAADLEQAGSRLILRRGRSENVLSALAVESGAHEVHALHHVEPWWRNAERAVRKALDLQL
HQGIYLAPPGSVLTGGGTPFKIYTPFWRALQERMPPAPPLPAPKLTAPEAWPNSDRLEDW
QLLPTHPDWAGGMRAEWTPGEAGAAERLETFARRAARYAERRNLPAMLGTSRLSPHLHFG
EVSPAQVWHGVANAGGSVDVFLGELGWRDYAANVIHQFPDYAAHSYKEEFERLPWRTGPE
AEADLKAWQQGRTGYPIVDAGMRELWATGWMHNRVRMIVASFLIKHLLIDWRRGEEWFWD
TLVDADYAQNAVNWQWSAGSGVDANMFVRIMAPLTQSPKFDAAGYIREWVPELAGLGDAE
IHDPGLLRPRGYPAKIVEHTEGRARALAAHAAMKAV
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgcccatcatcgtctggctccgccgcgacctgcgcctggctgatcagcccgct
ttccgggctgccgccgcgcgcggccccgtaatcccggtctatgtgcttgatgacgaatcg
ccacggtaccggcggatgggggcggcctcgcgctggtggctgcatcattcgctggcgcgg
cttgcggccgatctggagcaggcaggttcgcggctgatcctgcgccgtggcaggagcgag
aacgtgctttcggccctcgcggtggaaagcggggcgcacgaagttcatgcgctgcaccat
gtcgaaccctggtggcgcaatgccgaacgtgccgtgcgcaaggcgcttgatctgcagctg
catcaggggatctaccttgctccgcccggctcggtgctgacgggcggcggcacgccgttc
aagatttacaccccgttttggcgggccttgcaggaacggatgccgccagcgccgccattg
ccggccccaaagctgacggcgccggaagcctggcccaacagcgatcggttggaagactgg
caattgctcccgacacaccccgattgggcgggcggaatgcgggcggaatggaccccgggc
gaggctggcgcggctgagcgcctggaaacctttgcccgccgcgccgcacgctatgcggag
cggcgcaatctgccggcgatgctcggcacctcgcgcctctcgccgcacctccatttcggc
gaggtttcgccggcacaggtctggcacggcgtggccaatgccggcggttcggttgacgtg
ttcctgggtgaactgggctggcgcgattacgccgccaatgtgatccatcagttcccggac
tacgccgcgcattcctacaaggaagagttcgagcgcttgccctggcgcaccgggcccgag
gctgaggccgatctcaaggcctggcagcagggccgcaccggctatccgatcgtcgatgcc
ggcatgcgtgagctgtgggcgactggctggatgcacaaccgggtgcggatgatcgtcgcc
agcttcctcatcaagcatctgctgatcgactggcggcgcggcgaggagtggttctgggac
accttggtcgatgccgattatgcccagaatgcggtcaactggcagtggagcgccggttcg
ggcgtcgatgccaacatgttcgtgcggatcatggccccgctgacgcagagcccgaagttc
gatgccgccggctatatccgcgagtgggtgcccgaacttgccgggctgggcgatgctgag
atccatgatcccggcttgctgcgtccgcgcggctatccggccaagattgtcgaacacacc
gagggacgcgcccgcgccctggcagctcatgcggccatgaaagcagtttga
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