Novosphingobium ginsenosidimutans: FRF71_12530
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Entry
FRF71_12530 CDS
T06189
Name
(GenBank) MBL fold metallo-hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ngf
Novosphingobium ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:
ngf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ngf03016
]
FRF71_12530
Enzymes [BR:
ngf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
FRF71_12530
Transfer RNA biogenesis [BR:
ngf03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
FRF71_12530
Prokaryotic type
FRF71_12530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QEA17586
UniProt:
A0A5B8S7K2
LinkDB
All DBs
Position
complement(2543144..2544208)
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AA seq
354 aa
AA seq
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MGLGIAGLLVIVGLILLALRDRLAQRAFDTAIEQNVGVDRSAALPDGIHVYVCGSGSPMP
DADRAGPCLAVLAGRQGFIFDAGAGSIRKLGRMGFPMDRLRGAYLTHLHSDHIDGLGELL
LQAWIAGSRGTPLPVSGPAGTDQVIGGLIQAYKLDSGYRIAHHGPAVARPGGFGGTAQII
DLPEGQPSKVVYDQNGVKITVIRVIHDPVKPAFGYRLDYKGRSVAISGDTIYAPDFVNAA
RGADVMFHEALNPKMIGAMQAQLAKRGRADSAKIMGDIPGYHASPEDAARAAMEAGAKAL
VLYHMVPAPPAKLIERLFVGDAPKIYSGDLRLAHDGMIVSLPAGSQSVDYSEAF
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atcggcctcggcattgccgggctgttggtgattgttgggctgatcctgctggcattgcgc
gatcgcctggcgcagcgggccttcgatacagcgattgaacagaatgtcggcgttgatcgc
tcggccgctctccccgatggaatacatgtctatgtctgcggctcaggctctcccatgccc
gatgcggatcgcgccgggccgtgcctggccgtgctggctggccgccagggcttcatcttt
gatgccggcgcgggatcgatccgcaagctcggccggatgggcttcccgatggaccgcctc
cggggcgcctacctgacgcaccttcattccgatcacatcgatggcctgggtgagctcctg
ctccaggcctggatcgccggatcgcgcggcacaccgctgccggtcagcgggccggccggc
accgatcaggtgattggcggcctgatccaggcctacaagctcgacagtggctaccgcatt
gctcaccacggccccgccgtcgcgcggccgggcggctttggcggcacggcgcagatcatt
gacctgccggagggtcaaccaagcaaggtggtctacgaccagaacggcgtgaagattacc
gtgatccgggtgatccacgatccggtgaagcccgccttcggttaccggctggactacaag
ggccgctcggtggcgatcagcggcgatacgatctacgcgccggacttcgtgaacgcggcg
aggggcgcggatgtgatgttccatgaagccctcaaccccaaaatgatcggcgcaatgcaa
gcccagctcgccaagcgcggccgggctgattcagccaagataatgggcgacattccgggc
tatcatgccagcccggaagacgcggcgcgtgcggccatggaggccggcgcaaaggcgctg
gtgttgtaccatatggtcccggccccgccggccaagctgatcgaacggctgtttgtgggc
gatgcgccaaagatctattcgggcgacctgcgcctggctcacgatggcatgatcgtcagc
ctgccagcgggcagccagtccgtggactattccgaagctttctag
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