Novosphingobium ginsenosidimutans: FRF71_12965
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Entry
FRF71_12965 CDS
T06189
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ngf
Novosphingobium ginsenosidimutans
Pathway
ngf00300
Lysine biosynthesis
ngf00470
D-Amino acid metabolism
ngf01100
Metabolic pathways
ngf01110
Biosynthesis of secondary metabolites
ngf01120
Microbial metabolism in diverse environments
ngf01230
Biosynthesis of amino acids
Module
ngf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ngf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FRF71_12965
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FRF71_12965
Enzymes [BR:
ngf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
FRF71_12965
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QEA16966
UniProt:
A0A5B8S5V3
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All DBs
Position
complement(2631895..2632710)
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AA seq
271 aa
AA seq
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MRVPFIKMHGLGNDFVVLDARDRDVPMMTNRLAAALADRKTGIGCDQLILLEPSDRADVR
MRIFNADGSEVEACGNATRAIGLLLGKPAAIETLGGMLATNPVDAGVAVDMGEPRFDWDS
IPLAYPLDTLAMPVGWDGLESPGAVNVGNPHVVFFVPDTAATALEQLGPLIEHDPLFPAR
INVNVATIVSRDEIRLRVWERGVGETRACGTGACATAVAAMRRGLVDRGTVTVRLPGGPL
QIAWGADNRITMTGPATESFRGTFDPADYDA
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttccgttcatcaagatgcatggcctgggcaacgactttgtcgtgctcgatgcg
cgtgatcgcgatgtgccgatgatgaccaaccggctggcggctgcgctggccgatcgcaag
accggaattggctgcgatcaactgatcctgcttgaaccgtcggaccgggccgacgtgcgg
atgcgaatcttcaacgccgatggcagcgaagtggaagcctgtggcaatgccacccgggca
ataggcttgctgctgggcaagccggctgcgatcgagactttgggcggaatgctggcgacc
aatccggtggatgctggcgtggccgtcgacatgggtgaacccaggttcgactgggattcc
atccccctcgcctatccgctcgataccctggccatgccggtcggctgggacgggttggaa
agccccggcgcggtcaatgtcggcaatccgcatgtggtgttctttgtgccggataccgct
gcgacagcgctggagcagcttggcccgttgatcgaacatgacccgctcttcccggcccgg
atcaatgtcaatgtcgccaccattgtctcgcgcgatgaaatccgcctgcgggtatgggag
cgcggcgtgggtgagacgcgcgcttgcggcaccggggcctgtgcaacggccgtagcggcg
atgcgccggggtctggttgatcgcggcacggtgaccgtacgcctgccgggcggcccgctg
cagatcgcttggggtgccgacaaccgcatcaccatgaccggtccggccaccgagagcttc
cgcggcaccttcgatcctgccgactacgacgcctga
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