Novosphingobium ginsenosidimutans: FRF71_13410
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Entry
FRF71_13410 CDS
T06189
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
ngf
Novosphingobium ginsenosidimutans
Pathway
ngf00630
Glyoxylate and dicarboxylate metabolism
ngf00680
Methane metabolism
ngf01100
Metabolic pathways
ngf01120
Microbial metabolism in diverse environments
ngf01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ngf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FRF71_13410
09102 Energy metabolism
00680 Methane metabolism
FRF71_13410
Enzymes [BR:
ngf01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
FRF71_13410
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_Nqo3
Fer4_10
Fer4_21
Fer4_2
Fer4_17
Fer4_8
Fer4_6
Fer4_15
Fer4_9
Fer4_18
Fer4_4
Fer4_16
Motif
Other DBs
NCBI-ProteinID:
QEA17047
UniProt:
A0A5B8S8Z1
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All DBs
Position
complement(2727509..2730352)
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AA seq
947 aa
AA seq
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MGYERQVDFGTPAVQSDSAVSLTIDGRSVTVPAGTSIMRAAAESGGSIPSLCATDSVKAF
GSCRMCLVQIEGRRGTPASCTTPVEPGMVVHTQTALLTRLRRGVMELYISDHPLDCLTCS
ANNDCELQDTAAEVGLRDVRYGYAGENHLGLETDASNPYFDFDPSKCIACSRCVRACDEV
QGTLALTMDGRGFASKISAGQAGDDFLSSECVSCGACVQACPTATLQEKAVKEIGKPERA
VITTCAYCGVGCTFRAEMRGEQLVRMVPWKDGKANRGHSCVKGRFAWGYANHQDRITEPM
IRDSIEEPWRVVSWAEAFAHTAARLNAIKAQHGPRALGGITSSRCTNEETFLVQKLVRAG
FGSNNVDTCARVCHSPTGYGLKTTFGTSAGTQDFDSVMDSDVILVIGANPTDAHPVFASR
MKRRLRQGAKLIVIDPRRIDLVRSPHIQAAHHLPLQPGTNVAVLTAMAHVIVTEGLADEA
FIRERCDWDEYQDWARFVSDEKHSPEVLEAVTRVPAAELRAAARLFATGGNGAIYYGLGV
TEHSQGSSTVMAIANLAMVTGNIGRRGVGVNPLRGQNNVQGACDMGSFPHELSGYRHISD
VATRGLFEQVWGVTLDPEPGLRIPNMLDAALDGSFRAIYIQGEDILQSDPNTHHVAAGLK
AMELVIVHDLFLNETANYAHVFLPGSTFLEKNGTFTNAERRIQLVRKVMEPANGLEDWEV
TQEIARAMGLEWNYAHPSEIMDEIARLTPTFAGVSFGRLDREGSLQWPVNDKAPDGSPIM
HVDGFVRGKGKFVVTDYVPTDEKTGPRFPLLLTTGRILSQYNVGAQTRRTANTVWHDEDL
LEIHPTDAENRGIKSGDWVRLASRTGETTLRAEVTERVAPGVVYTTFHHPATQANVVTTE
FSDWATNCPEYKVTAVQVSPSNGPTEWQESYASWSEKSRRIAAEPAE
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgggctatgaacggcaagtcgatttcggcacgccggcggtccagtcggacagcgcagtt
tcgctgaccatcgacggtcgttcggttactgtccccgccgggaccagcatcatgcgcgcg
gcggccgagagcggcggctcgatccccagcctctgcgcgaccgacagcgtcaaggcgttc
ggttcgtgccggatgtgcctcgtccagattgagggacggcgcggcacccccgcgagctgc
accaccccggtcgagcccggcatggtggtgcacacccagaccgcgctgcttacccggctg
cggcgcggggtgatggaactctacatctccgatcatccgctcgattgcctgacctgcagc
gccaacaacgattgcgagttgcaggataccgccgccgaagtcggtttgcgggacgtgcgt
tatggctatgcgggcgagaaccacctcggcctcgaaaccgatgcctcaaacccctatttc
gatttcgacccctcgaaatgcatcgcctgctcgcgctgcgtacgcgcctgtgacgaagtc
cagggcacgctcgcactgaccatggatggccgcggcttcgcctccaagatcagcgcgggc
caggccggcgacgatttcctgtccagcgaatgcgtttcctgcggcgcctgcgtgcaagcc
tgcccaaccgcgaccttgcaggaaaaggcggtcaaggaaatcggcaagcccgagcgcgcg
gtgatcaccacctgcgcctattgcggggtcggctgcacgttccgcgccgaaatgcgcggg
gagcagctggtccggatggtgccgtggaaggacggcaaggccaaccgcggccactcctgc
gtcaagggccgcttcgcctggggctatgccaaccaccaggaccggatcacggagccgatg
atccgggattcgatcgaggaaccctggcgtgtggtcagctgggcggaagcctttgctcac
accgccgcgcggctgaacgcgatcaaggctcagcatggcccgcgcgcactcggcgggatc
acctcgagccgctgcaccaacgaggaaaccttcctggtccagaagctggtccgcgccggg
ttcggatcgaacaatgtcgatacctgcgcacgggtctgtcactcaccgaccggctatggc
ctgaagactacctttgggacttcggccggcacgcaagactttgactcggtgatggattcg
gacgtgatcctcgtgatcggcgccaacccaaccgacgcgcaccccgtctttgcttcacgc
atgaagcggcggttgcgccagggcgccaagctgatcgtgatcgacccgcgccggatcgac
ctggtccgtagcccgcacatccaggccgcgcatcacctcccgctccagcccggcaccaat
gtcgcggtgctgaccgcaatggctcacgtcatcgtcaccgaaggcctcgccgacgaggcc
ttcattcgcgaacgctgcgactgggacgaataccaggactgggcgcgcttcgtgtccgac
gagaagcacagcccggaagtgctggaggccgtgacccgcgtccctgccgccgagctgcgc
gctgctgcccgactgtttgccaccggtggcaacggggcgatctattacggcctcggcgtg
accgagcacagccagggttcctcaaccgtcatggcgatcgccaaccttgccatggttacc
ggcaacatcggccggcgcggtgtgggcgtgaacccgctccgcgggcaaaacaacgtccag
ggcgcctgcgacatgggctcgttcccgcacgagctttcgggctatcgccacatctccgac
gtcgccacccgcggcctgttcgaacaggtctggggcgtcacgcttgatcccgaacctggc
ctgcgcattcccaacatgctcgacgccgcgctcgatggctcgttccgggcgatctacatc
cagggcgaagacatcctccagtccgatcccaacacccatcatgtcgccgccggactcaag
gcaatggaactggtcatcgtccacgacctgttcctcaacgagaccgccaattacgcacat
gtcttcctgccgggttcgaccttcctcgagaagaacggcaccttcaccaatgccgaacgg
cggattcaactggtccgcaaggtgatggagccggctaatggcctcgaggactgggaggtg
acacaggagatcgcccgggcgatggggcttgagtggaactacgcgcacccgagcgagatc
atggacgagatcgcgcggcttaccccgacctttgccggagtttcgtttggacggctcgat
cgcgagggttcgctgcagtggccggtcaatgacaaggcgcctgatggcagcccgatcatg
cacgttgatgggttcgtgcggggcaagggtaagtttgttgtgaccgactatgtgccgacc
gacgagaagaccggcccgcgcttcccactgctgctcaccaccggacgcatcctcagccag
tacaacgtcggcgcgcaaacccggcggactgcgaacacagtctggcacgatgaggacctg
ctcgagatccacccgaccgacgctgagaaccgcggcatcaagagcggtgactgggtccgc
cttgccagcaggaccggcgagaccaccctgcgcgccgaggtgacagagcgggtcgcgccg
ggcgtggtctacactacctttcaccaccctgcgacccaggccaatgtcgtcacgaccgag
ttctccgactgggctacgaactgtccggagtacaaggttacggcggtgcaggtttcgccc
agcaatgggccaaccgaatggcaagaaagctatgccagctggtccgaaaagagccgccgt
atcgcggccgaaccggccgagtag
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