KEGG   Novosphingobium ginsenosidimutans: FRF71_13585
Entry
FRF71_13585       CDS       T06189                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ngf  Novosphingobium ginsenosidimutans
Pathway
ngf00010  Glycolysis / Gluconeogenesis
ngf00020  Citrate cycle (TCA cycle)
ngf00260  Glycine, serine and threonine metabolism
ngf00280  Valine, leucine and isoleucine degradation
ngf00310  Lysine degradation
ngf00380  Tryptophan metabolism
ngf00620  Pyruvate metabolism
ngf00630  Glyoxylate and dicarboxylate metabolism
ngf00640  Propanoate metabolism
ngf00670  One carbon pool by folate
ngf00785  Lipoic acid metabolism
ngf01100  Metabolic pathways
ngf01110  Biosynthesis of secondary metabolites
ngf01120  Microbial metabolism in diverse environments
ngf01200  Carbon metabolism
ngf01210  2-Oxocarboxylic acid metabolism
ngf01240  Biosynthesis of cofactors
Module
ngf_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ngf_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ngf_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
ngf_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ngf00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    FRF71_13585 (lpdA)
   00020 Citrate cycle (TCA cycle)
    FRF71_13585 (lpdA)
   00620 Pyruvate metabolism
    FRF71_13585 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    FRF71_13585 (lpdA)
   00640 Propanoate metabolism
    FRF71_13585 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    FRF71_13585 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    FRF71_13585 (lpdA)
   00310 Lysine degradation
    FRF71_13585 (lpdA)
   00380 Tryptophan metabolism
    FRF71_13585 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    FRF71_13585 (lpdA)
   00670 One carbon pool by folate
    FRF71_13585 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ngf04147]
    FRF71_13585 (lpdA)
Enzymes [BR:ngf01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     FRF71_13585 (lpdA)
Exosome [BR:ngf04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   FRF71_13585 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored NAD_binding_8 GIDA HI0933_like FAD_binding_3 DAO AlaDh_PNT_C Thi4 2-Hacid_dh_C GMC_oxred_N 3HCDH_N
Other DBs
NCBI-ProteinID: QEA17079
UniProt: A0A5B8S659
LinkDB
Position
complement(2765525..2766937)
AA seq 470 aa
MSEQYDVIVLGSGPGGYVAAIRCAQLGLKTAIVERENLGGICLNWGCIPTKALLRSAEVL
HNMKHAAAYGLAADNIRADLDAVVKRSRGVAKQLNQGVTHLMKKNKITVHMGTGVLKGAG
KLEVTGDKGTETLTAKHIIVATGARARDLPFAPADGKRVWTYRHAMVPQELPSKLLVIGS
GAIGIEFASFYNDMGSEVTVVEMMDRIVPVEDADVSAFLEKALVKQGMTIMTGAGVEKLD
VTASGVQAAIKGKDGKVVTSDFSHVIVAVGIVPNTENIGLEALGVKAERGIIAIDDHGRT
NVKGLWAIGDVTPGPWLAHKASHEGVIAAESIAKELGNKDVHPHAMDRRNIPGCTYCHPQ
VASVGLTEAKAKEAGHEVKAGTFPFIGNGKAIALGEPEGFIKTVFDAKTGELLGAHMVGA
EVTELIQGYVVGKTLETTEAELMATVFPHPTLSEMMHESVLAAYGRALHI
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgtctgaacagtacgacgtcattgtccttggttcgggaccgggcggctatgtcgcggcg
atccgctgcgcgcagcttggcctgaagaccgccatcgtcgagcgcgagaacctgggcggg
atctgcctcaactggggctgtattcccaccaaggcgctgctgcgttcggccgaggtgctg
cacaacatgaagcacgccgctgcctatggcctggcggccgacaatatccgcgccgacctg
gatgcagtggtgaagcgcagccgcggtgtggccaagcagctcaaccagggcgtcacccac
ctgatgaagaagaacaagatcaccgtgcacatgggcaccggggtcctgaagggggcaggc
aagctggaagttaccggtgacaagggcaccgagaccctcaccgccaagcacatcatcgtc
gccaccggcgcacgggcccgcgacctgcctttcgcgccggctgacggcaagcgcgtctgg
acctatcgccacgcgatggttccgcaggaactgccgagcaagttgctggtgatcggttcc
ggcgcgatcgggatcgagttcgccagcttctacaatgatatgggcagcgaagttaccgtt
gtcgaaatgatggaccggatcgtgccggttgaggatgccgatgtttcggccttcctcgag
aaggcgctggtcaagcagggcatgacgatcatgactggcgccggggtcgagaagctcgac
gttaccgcctcaggcgtgcaggccgcgatcaagggcaaggacggcaaggtcgttaccagt
gatttcagccacgtgattgtcgcggtcggcatcgttcccaacaccgagaacatcggcctg
gaagcgctgggcgtgaaggccgagcgcgggattatcgcgatcgacgatcacggccgcacc
aatgtgaagggcctttgggcgatcggcgacgttacgcccggcccgtggctcgcccacaag
gccagccatgaaggtgtgatcgcggcggaaagcatcgccaaggaactgggcaacaaggat
gtccacccccacgcgatggaccgtcgcaacatccctggctgcacctattgtcacccgcag
gtcgcctcggtcggcctgactgaggccaaggccaaggaggccgggcacgaggtcaaggcc
gggaccttccccttcattggcaacggcaaggcgatcgcgctgggtgagccggaaggcttc
atcaagaccgtatttgacgccaagactggcgaactgctgggcgcccatatggtcggcgcg
gaagtgaccgagctgatccagggctatgtcgttggcaagacgctcgagacgacggaagct
gaattgatggccacagtcttccctcacccgacgctcagcgagatgatgcacgaaagcgtc
ctcgccgcttacgggcgcgcgctgcacatttaa

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