Novosphingobium ginsenosidimutans: FRF71_13585
Help
Entry
FRF71_13585 CDS
T06189
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
ngf
Novosphingobium ginsenosidimutans
Pathway
ngf00010
Glycolysis / Gluconeogenesis
ngf00020
Citrate cycle (TCA cycle)
ngf00260
Glycine, serine and threonine metabolism
ngf00280
Valine, leucine and isoleucine degradation
ngf00310
Lysine degradation
ngf00380
Tryptophan metabolism
ngf00620
Pyruvate metabolism
ngf00630
Glyoxylate and dicarboxylate metabolism
ngf00640
Propanoate metabolism
ngf00670
One carbon pool by folate
ngf00785
Lipoic acid metabolism
ngf01100
Metabolic pathways
ngf01110
Biosynthesis of secondary metabolites
ngf01120
Microbial metabolism in diverse environments
ngf01200
Carbon metabolism
ngf01210
2-Oxocarboxylic acid metabolism
ngf01240
Biosynthesis of cofactors
Module
ngf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ngf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ngf_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
ngf_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ngf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
FRF71_13585 (lpdA)
00020 Citrate cycle (TCA cycle)
FRF71_13585 (lpdA)
00620 Pyruvate metabolism
FRF71_13585 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
FRF71_13585 (lpdA)
00640 Propanoate metabolism
FRF71_13585 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FRF71_13585 (lpdA)
00280 Valine, leucine and isoleucine degradation
FRF71_13585 (lpdA)
00310 Lysine degradation
FRF71_13585 (lpdA)
00380 Tryptophan metabolism
FRF71_13585 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
FRF71_13585 (lpdA)
00670 One carbon pool by folate
FRF71_13585 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngf04147
]
FRF71_13585 (lpdA)
Enzymes [BR:
ngf01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
FRF71_13585 (lpdA)
Exosome [BR:
ngf04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
FRF71_13585 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
FAD_oxidored
NAD_binding_8
GIDA
HI0933_like
FAD_binding_3
DAO
AlaDh_PNT_C
Thi4
2-Hacid_dh_C
GMC_oxred_N
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
QEA17079
UniProt:
A0A5B8S659
LinkDB
All DBs
Position
complement(2765525..2766937)
Genome browser
AA seq
470 aa
AA seq
DB search
MSEQYDVIVLGSGPGGYVAAIRCAQLGLKTAIVERENLGGICLNWGCIPTKALLRSAEVL
HNMKHAAAYGLAADNIRADLDAVVKRSRGVAKQLNQGVTHLMKKNKITVHMGTGVLKGAG
KLEVTGDKGTETLTAKHIIVATGARARDLPFAPADGKRVWTYRHAMVPQELPSKLLVIGS
GAIGIEFASFYNDMGSEVTVVEMMDRIVPVEDADVSAFLEKALVKQGMTIMTGAGVEKLD
VTASGVQAAIKGKDGKVVTSDFSHVIVAVGIVPNTENIGLEALGVKAERGIIAIDDHGRT
NVKGLWAIGDVTPGPWLAHKASHEGVIAAESIAKELGNKDVHPHAMDRRNIPGCTYCHPQ
VASVGLTEAKAKEAGHEVKAGTFPFIGNGKAIALGEPEGFIKTVFDAKTGELLGAHMVGA
EVTELIQGYVVGKTLETTEAELMATVFPHPTLSEMMHESVLAAYGRALHI
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacagtacgacgtcattgtccttggttcgggaccgggcggctatgtcgcggcg
atccgctgcgcgcagcttggcctgaagaccgccatcgtcgagcgcgagaacctgggcggg
atctgcctcaactggggctgtattcccaccaaggcgctgctgcgttcggccgaggtgctg
cacaacatgaagcacgccgctgcctatggcctggcggccgacaatatccgcgccgacctg
gatgcagtggtgaagcgcagccgcggtgtggccaagcagctcaaccagggcgtcacccac
ctgatgaagaagaacaagatcaccgtgcacatgggcaccggggtcctgaagggggcaggc
aagctggaagttaccggtgacaagggcaccgagaccctcaccgccaagcacatcatcgtc
gccaccggcgcacgggcccgcgacctgcctttcgcgccggctgacggcaagcgcgtctgg
acctatcgccacgcgatggttccgcaggaactgccgagcaagttgctggtgatcggttcc
ggcgcgatcgggatcgagttcgccagcttctacaatgatatgggcagcgaagttaccgtt
gtcgaaatgatggaccggatcgtgccggttgaggatgccgatgtttcggccttcctcgag
aaggcgctggtcaagcagggcatgacgatcatgactggcgccggggtcgagaagctcgac
gttaccgcctcaggcgtgcaggccgcgatcaagggcaaggacggcaaggtcgttaccagt
gatttcagccacgtgattgtcgcggtcggcatcgttcccaacaccgagaacatcggcctg
gaagcgctgggcgtgaaggccgagcgcgggattatcgcgatcgacgatcacggccgcacc
aatgtgaagggcctttgggcgatcggcgacgttacgcccggcccgtggctcgcccacaag
gccagccatgaaggtgtgatcgcggcggaaagcatcgccaaggaactgggcaacaaggat
gtccacccccacgcgatggaccgtcgcaacatccctggctgcacctattgtcacccgcag
gtcgcctcggtcggcctgactgaggccaaggccaaggaggccgggcacgaggtcaaggcc
gggaccttccccttcattggcaacggcaaggcgatcgcgctgggtgagccggaaggcttc
atcaagaccgtatttgacgccaagactggcgaactgctgggcgcccatatggtcggcgcg
gaagtgaccgagctgatccagggctatgtcgttggcaagacgctcgagacgacggaagct
gaattgatggccacagtcttccctcacccgacgctcagcgagatgatgcacgaaagcgtc
ctcgccgcttacgggcgcgcgctgcacatttaa
DBGET
integrated database retrieval system