Neorhizobium galegae bv. orientalis HAMBI 540: RG540_CH00170
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Entry
RG540_CH00170 CDS
T03244
Symbol
betA
Name
(GenBank) Integration host factor subunit BetA
KO
K05788
integration host factor subunit beta
Organism
ngg
Neorhizobium galegae bv. orientalis HAMBI 540
Brite
KEGG Orthology (KO) [BR:
ngg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngg03032
]
RG540_CH00170 (betA)
03036 Chromosome and associated proteins [BR:
ngg03036
]
RG540_CH00170 (betA)
03400 DNA repair and recombination proteins [BR:
ngg03400
]
RG540_CH00170 (betA)
DNA replication proteins [BR:
ngg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RG540_CH00170 (betA)
Chromosome and associated proteins [BR:
ngg03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
RG540_CH00170 (betA)
DNA repair and recombination proteins [BR:
ngg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
RG540_CH00170 (betA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Regnase_1_C
Motif
Other DBs
NCBI-ProteinID:
CDN46215
UniProt:
A0A068SM41
LinkDB
All DBs
Position
14374..14673
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AA seq
99 aa
AA seq
DB search
MIKSELVQIVAARNPHLYHRDVENIVNAVLDEITDALAGGNRVELRGFGAFSVKNRPSRS
GRNPRTGESVFVEEKWVPFFKTGKELRERLNPGLDDEED
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaagtcagaactggtgcagatcgttgcggctcgcaatccgcatctctaccaccgc
gacgtcgagaacatcgtcaatgccgtgctcgacgagatcacagatgccctggcaggcgga
aatcgtgtcgaactgcgaggcttcggcgcgttttctgtgaaaaatcgtccctcccggtcc
ggtcgcaacccgcgcaccggcgagagcgtctttgtcgaggagaaatgggttcctttcttc
aaaacaggcaaggaactgcgcgagcgcttgaatccgggtctggacgacgaagaggattga
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