Neorhizobium galegae bv. orientalis HAMBI 540: RG540_CH04240
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Entry
RG540_CH04240 CDS
T03244
Name
(GenBank) Protein Cpn60
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ngg
Neorhizobium galegae bv. orientalis HAMBI 540
Pathway
ngg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RG540_CH04240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngg03019
]
RG540_CH04240
03110 Chaperones and folding catalysts [BR:
ngg03110
]
RG540_CH04240
03029 Mitochondrial biogenesis [BR:
ngg03029
]
RG540_CH04240
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngg04147
]
RG540_CH04240
Enzymes [BR:
ngg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RG540_CH04240
Messenger RNA biogenesis [BR:
ngg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RG540_CH04240
Chaperones and folding catalysts [BR:
ngg03110
]
Heat shock proteins
HSP60 / Chaperonin
RG540_CH04240
Mitochondrial biogenesis [BR:
ngg03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RG540_CH04240
Exosome [BR:
ngg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RG540_CH04240
Exosomal proteins of other body fluids (saliva and urine)
RG540_CH04240
Exosomal proteins of breast cancer cells
RG540_CH04240
Exosomal proteins of colorectal cancer cells
RG540_CH04240
Exosomal proteins of bladder cancer cells
RG540_CH04240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CDN46615
UniProt:
A0A068SNE5
LinkDB
All DBs
Position
complement(440431..442074)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKEIKFGRTAREKMLRGVDILADAVKVTLGPKGRNVIIDKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGNKAVAAGMNPMDLKRGI
DLAVADVVKDLQAKAKKISTSEEVAQVGTISANGDKQVGLDIAEAMQKVGNEGVITVEEA
KTAETELEVVEGMQFDRGYLSPYFVTNPEKMVADLDDAFILLHEKKLSNLQAMLPVLEAV
VQTGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEDLGIKLENVTLDMLGRTKKVSISKENTTIVDGAGSKADIEGRVGQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRIDDALNATRAAVQEGIVPGGGVALL
RSSVKITAKGANDDQEAGINIVRRALQSLVRQIAENAGDEASIVVGKILEKNEDNYGYNA
QTSEYGDMIVMGIVDPLKVVRTALQNAASVASLLITTEAMIAELPKKDSAGGGMPGGMGG
MGGMDMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaagaaatcaagttcggccgcaccgcgcgcgaaaagatgctgcgcggcgtc
gacattctcgctgacgcagtcaaggtaacgctcggcccgaagggccgtaacgtcatcatc
gacaagtccttcggcgctccgcgcatcaccaaggacggcgtatcggtcgccaaggaaatc
gaactcgaagacaagttcgaaaacatgggcgcccagatggtccgcgaagttgcttcgaag
accaacgacatcgccggcgacggcaccacgactgctaccgttcttgcccaggcgatcgtt
cgcgaaggcaacaaggccgttgcagccggcatgaacccgatggacctgaagcgcggcatc
gatctcgccgttgcagacgtcgtcaaggatctccaggccaaggccaagaagatctcgacc
tcggaagaagtcgcacaggttggcacgatctccgcaaacggcgacaagcaggtcggtctc
gacattgctgaagccatgcagaaggtcggcaacgaaggcgtcatcacggttgaagaagcc
aagaccgccgaaaccgaactcgaagtcgtcgaaggcatgcagttcgaccgcggctacctg
tcgccctacttcgtcaccaacccggaaaagatggttgccgatctcgacgacgctttcatt
ctccttcacgagaagaagctctcgaacttgcaggcaatgctcccggttctcgaagccgtc
gttcagaccggcaagccgctcctgatcatcgctgaagacgtcgaaggcgaagccctcgcc
accctcgtcgtcaacaagctgcgcggtggcctcaagatcgctgccgtcaaggctccgggc
ttcggcgatcgccgcaaggccatgctcgaagacatcgccatcctgacgggcggcactgtc
atctccgaagacctcggcatcaagctcgaaaatgtcacgctcgacatgctcggccgcacc
aagaaggtctcgatctccaaggaaaacaccacgatcgtcgacggcgccggctccaaggcc
gacatcgaaggccgcgttggtcagatcaaggctcagatcgaagaaaccacttccgactac
gaccgcgaaaagctgcaggaacgtctggccaagctggccggcggtgtcgccgtgatccgc
gtcggcggctcgacggaagtcgaagtcaaggaaaagaaggaccgcatcgacgacgccctc
aacgcgacgcgcgctgccgttcaggaaggcatcgtaccgggcggcggcgttgccctgctg
cgttcctccgtcaagatcaccgcaaagggtgcaaacgacgaccaggaagccggcatcaac
atcgttcgccgcgctcttcagtcgctggttcgccagatcgctgaaaacgctggtgacgaa
gcttcgatcgtggtcggcaagatcctcgaaaagaacgaagacaactacggctacaacgcc
cagacgtctgaatacggcgacatgatcgtcatgggcatcgtcgacccgctcaaggtcgtt
cgcacggctctgcagaacgcagcttcggttgcttcgctgctgatcaccaccgaagccatg
atcgccgaacttccgaagaaggattcggctggcggcggcatgcctggcggcatgggcggc
atgggcggcatggacatgatgtga
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