Neorhizobium galegae bv. orientalis HAMBI 540: RG540_CH16180
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Entry
RG540_CH16180 CDS
T03244
Name
(GenBank) Protein hfq
KO
K03666
host factor-I protein
Organism
ngg
Neorhizobium galegae bv. orientalis HAMBI 540
Pathway
ngg02024
Quorum sensing
ngg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RG540_CH16180
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RG540_CH16180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngg03019
]
RG540_CH16180
03036 Chromosome and associated proteins [BR:
ngg03036
]
RG540_CH16180
Messenger RNA biogenesis [BR:
ngg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RG540_CH16180
Chromosome and associated proteins [BR:
ngg03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
RG540_CH16180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Motif
Other DBs
NCBI-ProteinID:
CDN47790
UniProt:
A0A068SRU4
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All DBs
Position
1556500..1556742
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AA seq
80 aa
AA seq
DB search
MAERSQNLQDLFLNTVRKQKISLTIFLINGVKLTGVVTSFDNFCVLLRRDGHSQLVYKHA
ISTIMPGQPMQMFETEENAA
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacgttctcagaacctgcaggatttatttctcaataccgttcgcaagcagaag
atttccctgacgattttcctgatcaacggggtcaagctgacaggtgtcgtgacctctttc
gacaacttctgcgtcctgctgcgccgtgacggccattctcagctcgtgtataagcacgcg
atctcgaccatcatgccgggccagcccatgcagatgttcgaaaccgaagagaacgccgcc
taa
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