Neorhizobium galegae bv. orientalis HAMBI 540: RG540_CH16890
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Entry
RG540_CH16890 CDS
T03244
Name
(GenBank) Peptidoglycan-binding domain 1 protein
KO
K21470
L,D-transpeptidase YcbB
Organism
ngg
Neorhizobium galegae bv. orientalis HAMBI 540
Brite
KEGG Orthology (KO) [BR:
ngg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ngg01002
]
RG540_CH16890
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ngg01011
]
RG540_CH16890
Peptidases and inhibitors [BR:
ngg01002
]
Cysteine peptidases
Family C82
RG540_CH16890
Peptidoglycan biosynthesis and degradation proteins [BR:
ngg01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
RG540_CH16890
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
CDN47861
UniProt:
A0A068SQ33
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Position
1625682..1627619
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AA seq
645 aa
AA seq
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MQVTGTTLQHKHKKTSIALALVSGISIFTGAAVPAHAVTLLDLLRGGPGADRPRHADNGL
PGVGGNASMPSERSLADPEPLPKVSGPRYYTYKPDAERVVKTAAFAAASATDGRRLITEA
RVSAPPEIATALEAFYGKAGEPLWVTAGDVNEKARGVLSLFERAGEYGLEPADYILPVPA
LTTASVAAPADAATPINVSATTSAPVSAADSHDRALMQFELALSEKVLMFAQDMVRGRID
PNKVSGYHDFKRKDVKLSLVLPFAQTGTDVAAYLQGLAPQGPQFQALKAELATLRAAAAN
DGPRISLPDDILLKPGKSSPDMASIIAAIQHTGSEALKTKHAATLTAYQQTPDYTPELVE
IVKSFQAEVGLKADGVIGNATVRKMVGHTSKDKIEKVEVAMEQARWLPDDLGQRYVFINQ
PAFMVYYHDRGAEQFSMRVVVGGKANQTYFFQDEIETVEFNPYWGVPQSIIINEMLPHLR
QDPSYLDRMGYEVSIGGKAVPSSSVNWFGSTDKISVRQPPSGDNALGDLKILFPNSHAIY
MHDTPSKSFFQRDMRALSHGCVRLAEPRKMAAAVLGTTIDDVNGRIAAGQNVATKVPVRI
PVYVSYFTAWPNKDGKVEYFDDVYGRDDATVRAFAATTKVRAAQS
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgacggggacgacattgcagcacaaacacaaaaaaacttcgatcgcattggcg
ctcgtgtccggcatctcgatttttaccggagccgccgttcccgcacatgccgtgaccctt
ctcgatctcttgcgtggtggtcctggagcagaccggccaaggcacgccgataacggcctg
ccgggcgtcggcggcaatgccagcatgccgagcgagcgcagtctcgccgatcccgaaccg
ctgccgaaggtctcggggccgcgttattacacctataagccggatgccgagcgggttgtg
aagacggccgccttcgctgcagcgtccgcgacggacggcaggcgcctcatcaccgaggcc
agggtttctgccccgccggaaattgccaccgctctcgaagccttctacggcaaggccggg
gagcctctctgggtcaccgccggcgacgtcaatgaaaaggcgaggggcgttctgtcgctc
ttcgagcgtgccggcgaatatgggttggaaccggccgattacatcctgccggtcccggcg
ctgaccaccgcaagcgttgccgcgcccgccgatgcggcaacccccatcaatgtttccgca
acgacgtcggcgccggtttccgctgccgatagccacgaccgcgccctcatgcagttcgag
ctggcgctgtcggaaaaggtgctgatgtttgcgcaggacatggtgcgcggccgcatcgat
ccgaacaaggtatccggataccacgatttcaagcgcaaggacgtcaagctttcgctcgtc
ctgcctttcgcgcagaccggaaccgatgtcgcggcctatctccaaggccttgcgccgcag
ggtcctcaattccaggcgctgaaggcagagctcgcgacgctgcgcgccgccgccgccaac
gacggtccgcgcatttcgctgccggacgacattctcctgaagccgggcaagagcagcccg
gatatggcgagcatcatcgccgccatccagcataccggttccgaagcgctgaagaccaag
catgcggcgacgctgacggcctaccagcagaccccggactacacgcccgagctcgtcgag
atcgtcaaatccttccaggccgaagtcggcctcaaggctgacggcgtcatcggcaacgcg
acggtgcgcaagatggtcggccacacgtcgaaggacaagatcgagaaggtcgaagtcgcc
atggaacaggcgcgctggctgccggacgatctcggccagcgttacgtcttcatcaaccag
ccggcattcatggtctattatcatgaccgcggtgccgaacagttctcgatgcgcgtcgtg
gtcggcggcaaggccaatcagacctatttcttccaggacgagatcgaaacggtcgagttc
aacccctattggggcgtgccgcagtcgatcatcatcaacgagatgctgccgcacctgcgc
caggatccgagctatctcgaccggatgggttacgaggtgtcgatcggcggaaaggcggtg
ccgtcgagcagcgtcaactggttcggctcgaccgacaagatttccgtgcgccagccgccg
tctggcgacaacgcactcggcgatctgaagatcctcttcccgaacagccatgcgatctac
atgcatgacacgccctcgaagagcttcttccagcgcgacatgcgggcactgagccatgga
tgcgtacgtcttgccgaaccgcgcaagatggccgccgccgtgctcggcacgacgatcgac
gacgtgaacggccggatcgccgccggccagaacgtcgccaccaaggtaccggtcaggatc
ccggtctatgtctcctacttcaccgcctggccgaacaaggacggcaaggtcgaatatttc
gacgacgtctatggccgtgacgatgcgacggtgagagccttcgccgcgacgaccaaggtt
cgcgcggcccagagctga
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